Gene Spea_1175 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_1175 
Symbol 
ID5661574 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp1423734 
End bp1424648 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content42% 
IMG OID641235727 
ProductLysR family transcriptional regulator 
Protein accessionYP_001501037 
Protein GI157961003 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATACAC CTCCGCTTAG TATTGAAGCA TTATTGGTCT TAGATGCGAT TGAACATCGG 
GGCAGTTATG CCGCAGCAGC GGAGCAATTA AATAAAGTCC CTTCAGCACT TTCTTACATA
GTGCAAAAGC TAGAAGAACA ATTAGGCGTA ACATTATTTG TGCGACAAGG ACGGCGAGCG
GTGCTTACAC CCGCGGGTAA GCATTTATTA GTGGAAGGCC GTAAGGTCTT ATCTGTAATC
AATACTTTGT CAGAGCAAAC CCAAACCATC GCCAATGGCT GGGAGCCTAA AATTCGCATC
GCTTGCGACT CAATTATTGA TATCAATCCT ATTTTCACTG TCATACAGCA ATTTTTATCT
GAACATCAAA ACATTGAGGT GGATGTGCAA GAAGAGGTCA TGAATGGCAC TTGGGAAGCG
TTAATTGAAG ATAGAGTCGA TTTAGTGATT GGTGCCCCAG CTCCGGTACC TAATCAAAAA
GGGATCAGAG CAATAAAGAC TGGGGAATTA AACAGTGTAT TGGTTGTTAG CAAATCGCAT
GAGCTGGCAA CCGAGGCGTT GCGCGCTAAC GAGCAGACTC AAACAAGCGA ACTAAGCAAA
TATCGAAGCG TGATTGTTCA TGATACGGCG AAACATGAAA TTCCATGGTC AGCTAATTTG
CTCGAAGGCA GCCAACATTT TTATGTGAGC TCTATTACAC AAAAGATTGC CGCCATTCTT
GCTGGAATAG GAATTGGTCA TTTACCAACA TCTATGGCCC AGCCATATAT TGAGTTAGGC
GAGTTGGTTG TGATTGAATT AGAAAATAAA CCCGCACCTC AAGATTTATT TATGGCGTGG
AAAATCACAA ATAAAGGGAA AGGGTTGAAC CGGTTAAAGG CGATGTTACT AGAGGAAAAT
AACCCTAATG CTTAA
 
Protein sequence
MNTPPLSIEA LLVLDAIEHR GSYAAAAEQL NKVPSALSYI VQKLEEQLGV TLFVRQGRRA 
VLTPAGKHLL VEGRKVLSVI NTLSEQTQTI ANGWEPKIRI ACDSIIDINP IFTVIQQFLS
EHQNIEVDVQ EEVMNGTWEA LIEDRVDLVI GAPAPVPNQK GIRAIKTGEL NSVLVVSKSH
ELATEALRAN EQTQTSELSK YRSVIVHDTA KHEIPWSANL LEGSQHFYVS SITQKIAAIL
AGIGIGHLPT SMAQPYIELG ELVVIELENK PAPQDLFMAW KITNKGKGLN RLKAMLLEEN
NPNA