Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_1175 |
Symbol | |
ID | 5661574 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 1423734 |
End bp | 1424648 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 641235727 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001501037 |
Protein GI | 157961003 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATACAC CTCCGCTTAG TATTGAAGCA TTATTGGTCT TAGATGCGAT TGAACATCGG GGCAGTTATG CCGCAGCAGC GGAGCAATTA AATAAAGTCC CTTCAGCACT TTCTTACATA GTGCAAAAGC TAGAAGAACA ATTAGGCGTA ACATTATTTG TGCGACAAGG ACGGCGAGCG GTGCTTACAC CCGCGGGTAA GCATTTATTA GTGGAAGGCC GTAAGGTCTT ATCTGTAATC AATACTTTGT CAGAGCAAAC CCAAACCATC GCCAATGGCT GGGAGCCTAA AATTCGCATC GCTTGCGACT CAATTATTGA TATCAATCCT ATTTTCACTG TCATACAGCA ATTTTTATCT GAACATCAAA ACATTGAGGT GGATGTGCAA GAAGAGGTCA TGAATGGCAC TTGGGAAGCG TTAATTGAAG ATAGAGTCGA TTTAGTGATT GGTGCCCCAG CTCCGGTACC TAATCAAAAA GGGATCAGAG CAATAAAGAC TGGGGAATTA AACAGTGTAT TGGTTGTTAG CAAATCGCAT GAGCTGGCAA CCGAGGCGTT GCGCGCTAAC GAGCAGACTC AAACAAGCGA ACTAAGCAAA TATCGAAGCG TGATTGTTCA TGATACGGCG AAACATGAAA TTCCATGGTC AGCTAATTTG CTCGAAGGCA GCCAACATTT TTATGTGAGC TCTATTACAC AAAAGATTGC CGCCATTCTT GCTGGAATAG GAATTGGTCA TTTACCAACA TCTATGGCCC AGCCATATAT TGAGTTAGGC GAGTTGGTTG TGATTGAATT AGAAAATAAA CCCGCACCTC AAGATTTATT TATGGCGTGG AAAATCACAA ATAAAGGGAA AGGGTTGAAC CGGTTAAAGG CGATGTTACT AGAGGAAAAT AACCCTAATG CTTAA
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Protein sequence | MNTPPLSIEA LLVLDAIEHR GSYAAAAEQL NKVPSALSYI VQKLEEQLGV TLFVRQGRRA VLTPAGKHLL VEGRKVLSVI NTLSEQTQTI ANGWEPKIRI ACDSIIDINP IFTVIQQFLS EHQNIEVDVQ EEVMNGTWEA LIEDRVDLVI GAPAPVPNQK GIRAIKTGEL NSVLVVSKSH ELATEALRAN EQTQTSELSK YRSVIVHDTA KHEIPWSANL LEGSQHFYVS SITQKIAAIL AGIGIGHLPT SMAQPYIELG ELVVIELENK PAPQDLFMAW KITNKGKGLN RLKAMLLEEN NPNA
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