| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1151 |
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| Symbol | |
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| ID | 5661550 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 1390070 |
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| End bp | 1393201 |
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| Gene Length | 3132 bp |
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| Protein Length | 1043 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641235703 |
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| Product | hydrophobe/amphiphile efflux-1 (HAE1) family protein |
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| Protein accession | YP_001501013 |
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| Protein GI | 157960979 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTAGTG AATTTTTTAT TAACAGGCCT AAATTTGCCT TTGTTATCTC AACGGTTTTA
ACTTTGGTCG GTTTGATCTC AATTCCAGTG CTCTCGGTAT CTGAATTTCC CGAGATAGCG
CCACCTCAGG TAAGCGTTTC AACCAGCTAC TCTGGCGCCA GTGCCGATAT TGTTAAAGAC
ACCATAGCAC AGCCCTTAGA AGCAGAAGTT AACGGTGTCG AAGGCATGCT CTACATGGAG
TCTAAAAGTG CTAACGATGG TAGCTACTCA TTAAATGTGA CCTTTGAAGT AGGTACCGAT
GCCGATATGG CGCAGGTTAA GGTGCAAAAC CGAGTGCAAC AGGCCATGCC GCGTCTACCT
GAAGAGGTGA AGCGTCAAGG GGTGAAGGTT GAGAAACAGA GCCCGAATAT GTTGATGGTG
GTAAACCTTG TTTCCCCTAA CGAAACTTTC GACTCGCTGT TTATCACTAA CTATGCCGGT
CTAAATGTAA AAGATGCGCT GGCGCGTCAG TATGGTGTGT CAAAGGTGCA GGTTATTGGT
GCTCTCGATT ATGCGATGCG AATTTGGCTC GATCCTGATC AGATGGCCAG CCTTGGCGTG
ACGGCAACCG ATGTTATCGG GGCGCTGCAA GAGCAGAACA TTCAGGTGGC TGCTGGGCGT
ATCGGCGCTG CGCCAGTGGA TCCGGAGCAG CAGTTCCAGT ACACCCTGCA GACCAAAGGT
CGACTTAAAG ATCCCCAAGA GTTTTATGAC GTGATGATCC GTGCCAATAA CGACGGCTCA
AAAGTGGTTG TTGGTGATGT GGCTCGGGTG GAGCTTGGCT CGCAAACCTA CGATGCTCAG
GGTAAGTTGA ATAACAAACC TTCGGCGATT ATCTCAATTT ACCAGTCACC CGATGCAAAT
GCGTTGGAGG TAGGTAAGGC GATTAAGGCC GAGATGGAGA AGCTTTCTGA GCGTTTTCCT
AATGATCTTG AGTATGAAGT CTTGTACGAC ACCACAGAGT TTGTTGAAAC CTCAATCAAA
GAGGTGGTTC AGACCCTGTT TATCTCTATT GCGCTGGTGG TCTTTGTGGT GTTCATCTTC
CTACAGGATG TACGCTCAAC GCTAGTACCT GCTATTGCTA TTCCGGTTTC GCTTATCGGA
ACATTTGCCT TCTTACTCGC TTTTGGTATG AGCATCAACA CCGTCTCGCT ATTCGCGCTT
ATTCTCGCGA TTGGTATCGT GGTCGATGAT GCGATTGTAG TAGTAGAGAA CGTTACCCGC
TTGATGCAAG ATGAGGGCTT ATCGCCAAAA GAGGCAACCT CTAAGGCGAT GAAAGAGGTG
ACAGGTCCCA TTATTGCCAC CACCTTGGTT CTGCTTGCGG TGTTTGCGCC AACGGCTGTG
ATGCCCGGGA TCACCGGACA GATGTATGCA CAGTTCTCGG TGACCATCTG TATCTCAGTG
CTTATCTCAT CCATCAATGC ATTGACCTTG AGCCCCGCTC TGTGCGCCTC TGTACTGCGT
GCGCCTAAGT TACATGAAAA AGGTTTTCAT GCGGCCTTTA ACAAGCATTT TGAGCGTGTA
ACGGGCAAGT ATATGAAGTT GGTATCCTCC CTGACACGTA AGCTAGTGTT AGTGGGTATC
GTCTACGGCT GTTTAATTCT GTTAACCGGG GGGATTGCTA AAATTCTACC GTCAGGATTT
GTGCCAATGG AAGATAAGAA AGCCTTCATG GTGGATATTC AGCTGCCCGA TGGTGCATCC
CTTAACCGTA CCGAAGATGT GATGCGTGAT CTGGTGGAGC TGACACTGGC CGAGCCGGGA
GTAGAGAATG TTATTCACGC CAGTGGCTTT AGTATCTTGA CGGGCTCGGT TTCTTCAAAC
GGCGGCTTGA TGATTGTCAC CCTGTCGACC TGGGATGAGC GTGAGTCTGC GGATATGATG
GAGTCGGCGA TTGTGGCCAA GCTGCAAGCT AAGTATGCGG CGAACCCTGC GGTGAAGGCG
ATGGCATTCT CTTTGCCACC TATTCCTGGT GTGGGTAGTG TCGGTGGCTT CGAGTTTGTG
CTGCAAGACA CCCAAGGCCG TACCCCGCAA GAGCTAGCCT CTGTGATGCG CGCCTTGATT
ATGAAAGCCA ATGAGCAGCC TGAAATTGCC ATGGCCTTTA GTAACTTCCG CGCAGATGTA
CCGCAGATGT TTGTCGATGT TGATAGAGAC AAGGCCAAGG CGCTGGGGGT CTCACTCAAC
GAGATCTTCG CGACCATGCA AACCATGCTG GGCTCAATGT ACGTTAACGA CTTTAACCGC
TTCGGTAAGG TGTTTAGGGT CATCTTACAG GCTGAAACGG AGTATCGTAA TTCCGATAAA
GACATTTCGC GTTTTTATGT TCGCTCAAAA ACCGGTGAAA TGGTGCCACT TAGTACTCTC
GTCACTGTAA CGCCGATTTT AGGCCCTGAT GTGATGAACA ACTACAACAT GTTCAGCTCG
ACGACCATCA ATGGTTTCCC TGCAGCTGGG TTTAGCTCTG GTGACGCGAT TACGGCAATG
GAACGCGCTG CAAATGAGTC ACTGCCATCG GGTTATACCT ATGAGTGGAC AGGACAAACC
TATCAAGAGA TCAAGGCGGG TAACCTCGCG CCACTTATTT TCGGCTTGGC GTTAGTGTTT
ACTTACCTGT TCTTGGTGGC TCAGTATGAG AGTTGGACCA TTCCATTTGC GGTTATCCTC
GCGGTGCCGA TTGCGGTATT AGGAGCCTTC CTCAACATCT TGCTGGTAGG TTCAGACTTA
AACCTCTACG CCCAGATTGG TCTGGTGCTG CTTATCGGCC TCGCCTGTAA GAATGCCATC
TTGATTGTTG AGTTTGCTAA GCAGTTACGT GAAGAGGGCA AGAGTATTCT AGAAGCGGGC
GAGACTGCGG CGAGACTGCG TTTTCGTGCG GTACTGATGA CGGCTTTCTC TTTCCTATTA
GGTGTGTTGC CTCTGGTTAT TGCTACTGGC GCGGGGGCGG GTAGCCGCCG CGCTTTAGGC
TACTCGGTGT TCGGCGGTAT GTTAGCGGCC ACTGTGGTCG GGACGCTGCT TGTGCCAGTA
TTTTACGTCA TTATGCAAAA GATGCGTGAA AAGGCGAAAG GGCTGCCTCA AGACGAAGAG
GCTGCTAATT AA
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| Protein sequence | MISEFFINRP KFAFVISTVL TLVGLISIPV LSVSEFPEIA PPQVSVSTSY SGASADIVKD
TIAQPLEAEV NGVEGMLYME SKSANDGSYS LNVTFEVGTD ADMAQVKVQN RVQQAMPRLP
EEVKRQGVKV EKQSPNMLMV VNLVSPNETF DSLFITNYAG LNVKDALARQ YGVSKVQVIG
ALDYAMRIWL DPDQMASLGV TATDVIGALQ EQNIQVAAGR IGAAPVDPEQ QFQYTLQTKG
RLKDPQEFYD VMIRANNDGS KVVVGDVARV ELGSQTYDAQ GKLNNKPSAI ISIYQSPDAN
ALEVGKAIKA EMEKLSERFP NDLEYEVLYD TTEFVETSIK EVVQTLFISI ALVVFVVFIF
LQDVRSTLVP AIAIPVSLIG TFAFLLAFGM SINTVSLFAL ILAIGIVVDD AIVVVENVTR
LMQDEGLSPK EATSKAMKEV TGPIIATTLV LLAVFAPTAV MPGITGQMYA QFSVTICISV
LISSINALTL SPALCASVLR APKLHEKGFH AAFNKHFERV TGKYMKLVSS LTRKLVLVGI
VYGCLILLTG GIAKILPSGF VPMEDKKAFM VDIQLPDGAS LNRTEDVMRD LVELTLAEPG
VENVIHASGF SILTGSVSSN GGLMIVTLST WDERESADMM ESAIVAKLQA KYAANPAVKA
MAFSLPPIPG VGSVGGFEFV LQDTQGRTPQ ELASVMRALI MKANEQPEIA MAFSNFRADV
PQMFVDVDRD KAKALGVSLN EIFATMQTML GSMYVNDFNR FGKVFRVILQ AETEYRNSDK
DISRFYVRSK TGEMVPLSTL VTVTPILGPD VMNNYNMFSS TTINGFPAAG FSSGDAITAM
ERAANESLPS GYTYEWTGQT YQEIKAGNLA PLIFGLALVF TYLFLVAQYE SWTIPFAVIL
AVPIAVLGAF LNILLVGSDL NLYAQIGLVL LIGLACKNAI LIVEFAKQLR EEGKSILEAG
ETAARLRFRA VLMTAFSFLL GVLPLVIATG AGAGSRRALG YSVFGGMLAA TVVGTLLVPV
FYVIMQKMRE KAKGLPQDEE AAN
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