Gene Spea_1142 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_1142 
Symbol 
ID5661541 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp1378189 
End bp1379205 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content46% 
IMG OID641235694 
Productthreonine aldolase 
Protein accessionYP_001501004 
Protein GI157960970 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2008] Threonine aldolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value6.36367e-10 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTGATT TTCGCAGTGA TACGGTCACT AAGCCTACGG CTGCTATGCG CGCCGCTATT 
AGTCAGGCTG AAGTAGGGGA TGATGTTTAT GGCGATGATC CAAGTGTTAA CTACCTTGAA
GATATGGCCG CAGAGATGTT TGGTTATGAT AATGCATTAT TTACCTCTTC AGGGACTCAA
GCAAATTTAC TTGCCTTGAT GGCACACTGT GAGCGCGGCG ATGAATACCT ATGTGGTCAA
CAAGCTCATA ACTATAAGTT TGAAGGTGGT GGGGCGGCAG TTCTAGGAAG TATCCAGCCA
CAGCCACTAA CAAACCAAGC TGATGGCAGT ATCTTATTAA GCGATATCGA GGCAGCGATT
AAGCCCGATG ATATTCATTT TGCGCGTACG CGTTTATTGA GTTTAGAAAA TACCATTGGC
GGTAAGATAG TCCCGCAGGA ATATTTAGCC TCGGCTCAAG CGCTTGCGTT TGAACGCGGT
TTGAAAATTC ACTTAGATGG CGCACGTGTG GCTAATGCCG CTGTTGCACA AAATATTCCG
ATGACCGAAA TAACTCAGTA TTTCGACTCT GTCTCAATCT GTCTATCTAA GGGATTATGT
GCGCCAGTAG GCTCGATCCT TCTGGGGGAT GAGCGTTTAA TTACCAAGGC GAGACGCTGG
CGTAAAGTGC TTGGTGGCGG TATGCGCCAA GCTGGGATCT TAGCCTCTGC TGCGACGCTT
GCATTGACCG AACAGGTAGA GCGTTTAGCA GAAGATCATG ATAATGCTGC TTATCTTGCT
GCCGAGCTTG CTTTGATTGA AGGCTTTGAG GTCGATATGT CACAGGTGCA AACCAATATG
GTGTTTGCTG CGGTAAGTGA CAAGATTGAT ACCAAAGCGC TGGCATTAGA ATTGAAAGCT
AAAGGTATTT TATTGAGCCC AGGTAAAACG ATTCGTTTAG TGACCCATGC CGATATTTCT
AGAGCCGATA TCACGTTTTT TATCAGTGAA TTAAAGGGAC TGCTAAGCCG CGGTTAA
 
Protein sequence
MIDFRSDTVT KPTAAMRAAI SQAEVGDDVY GDDPSVNYLE DMAAEMFGYD NALFTSSGTQ 
ANLLALMAHC ERGDEYLCGQ QAHNYKFEGG GAAVLGSIQP QPLTNQADGS ILLSDIEAAI
KPDDIHFART RLLSLENTIG GKIVPQEYLA SAQALAFERG LKIHLDGARV ANAAVAQNIP
MTEITQYFDS VSICLSKGLC APVGSILLGD ERLITKARRW RKVLGGGMRQ AGILASAATL
ALTEQVERLA EDHDNAAYLA AELALIEGFE VDMSQVQTNM VFAAVSDKID TKALALELKA
KGILLSPGKT IRLVTHADIS RADITFFISE LKGLLSRG