Gene Spea_1141 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_1141 
Symbol 
ID5661540 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand- 
Start bp1377216 
End bp1377854 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content44% 
IMG OID641235693 
Producthypothetical protein 
Protein accessionYP_001501003 
Protein GI157960969 
COG category[S] Function unknown 
COG ID[COG2860] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0103239 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAGAAG TTAAAGTTAT CAGCTTTTTA TGGTTAATCG GTATTTTGGC CGAAGCAATG 
ACAGGTGCAC TGGCTGCTGG TAAAAAACAG ATGGACCTGT TTGGCGTAGT CATTATAGGC 
TGTGTTACCG CGATTGGTGG TGGCACGTTG CGCGATATTT TGCTCGGCAA CTACCCATTA 
ATCTGGATTG AGAATGTCCA TTACTTGATT GCCATTGCTG CTGCCTCTTT ACTTACAGTA 
ATGATCGCTC CAGTTATGCG TCACCTGTCT AAACTCTTTC TCGCAATCGA TGCGATAGGT 
TTAGCCGTGT TCTCGATTAT CGGTGCACAG AAAACCTTAT TGTTAGGCTT TAGTCCTGAA 
ATTGCGATTG TGATGGGTGT AGTAACAGGC GTATTTGGCG GCGTGATCCG CGATATTCTT 
TGTAATCAAG TGCCACTTAT CTTCAAGAAA GAGCTCTATG CATTGGTCGC GTTATTGACG 
GCATCGGCTT ACGTCGCCAT GAAGTTTAAT GGTGTACCCG AGTGGCTTAA CCTTTCAATA 
TCTCTGATCT TTGGCTTTAG CTTCAGAATG CTCGCCATTC GCTATAAGTG GTCAATGCCT 
AAATTTGATT ATCAGTATCA GTCTGATAAC GCCCATTAG
 
Protein sequence
MLEVKVISFL WLIGILAEAM TGALAAGKKQ MDLFGVVIIG CVTAIGGGTL RDILLGNYPL 
IWIENVHYLI AIAAASLLTV MIAPVMRHLS KLFLAIDAIG LAVFSIIGAQ KTLLLGFSPE 
IAIVMGVVTG VFGGVIRDIL CNQVPLIFKK ELYALVALLT ASAYVAMKFN GVPEWLNLSI 
SLIFGFSFRM LAIRYKWSMP KFDYQYQSDN AH