Gene Spea_1125 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_1125 
Symbol 
ID5661524 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand- 
Start bp1363058 
End bp1363606 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content45% 
IMG OID641235677 
Productprotein of unknown function YGGT 
Protein accessionYP_001500987 
Protein GI157960953 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones4 
Plasmid unclonability p-value0.00000165213 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGCAT TTAGTTTTCT GATAAGCACG GTATTCGATC TATACCTGAT GGTCGTGGTG 
TTACGTATCT GGCTACAATT AGCTAGAGCC GATTTTTATA ACCCTTTCAG TCAGTTTATC 
GTAAAGGCCA CTCACCCAAT TGTTGGCCCT TTAAGACGCG TACTGCCCTC TTTTGGCAGT 
TTTGATACCG CCTCTTTCGT ACTCGCAATA ACGGTTGTGG TACTTAAGTT TGTCATCTTA 
AGCCTGATGG CTGGTGCGGC AATTAATGTA CCTACCTTAC TGCTTGTCTC TTTAGTGTCG 
GTGATTAAAG AAGCCGGCGT ATTGCTATTT TGGATGCTGA TCCTACGTGC GATTTTAAGC 
TGGGTAAGCC AAGGCAGTAA CCCAATCGAA ATGGTAATGG GTCAGTTAAC TGAGCCGCTA 
CTTGCGCCAA TCCGCCGCAT TTTGCCAGCG ATGGGCGGAC TAGACTTATC ACTGCTAGTG 
ATGATGATTA TCCTTAACTT CGTCAATATC TTACTAGCGC AATACATACC ATTCTGGGCT 
AGCGTATAG
 
Protein sequence
MNAFSFLIST VFDLYLMVVV LRIWLQLARA DFYNPFSQFI VKATHPIVGP LRRVLPSFGS 
FDTASFVLAI TVVVLKFVIL SLMAGAAINV PTLLLVSLVS VIKEAGVLLF WMLILRAILS 
WVSQGSNPIE MVMGQLTEPL LAPIRRILPA MGGLDLSLLV MMIILNFVNI LLAQYIPFWA 
SV