| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1121 |
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| Symbol | |
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| ID | 5661520 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 1360391 |
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| End bp | 1361527 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641235673 |
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| Product | putative oxygen-independent coproporphyrinogen III oxidase |
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| Protein accession | YP_001500983 |
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| Protein GI | 157960949 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
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| TIGRFAM ID | [TIGR00539] putative oxygen-independent coproporphyrinogen III oxidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.002803 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTAACCC TGCCACCGTT AAGCCTATAT ATCCATATTC CTTGGTGCGT ACAAAAGTGC
CCTTACTGCG ACTTCAATTC CCATGGACAG CATGGTGAAC TGCCGCAAAC TGAATATATC
GATGCACTGA TAAAAGATCT CAAGCAAGAT CTGCATTACG TGCAAGGTAG ACGTTTAGAC
ACGATTTTTA TCGGTGGCGG CACGCCCTCT CTGTTCGATG CCGCGCAGAT TGGGCGCTTA
TTAGCTGAAG TCGATAAGCT AGTTCCGTTT AGCGACAATA TCGAAATTAC CATGGAGGCT
AATCCTGGCA CCCTTGAGCA CGATGATTTC GAAGCTTATT GCAAAGCTGG CGTGACCCGA
CTATCAATCG GGGTACAGAG TTTCTCTAGC GACAAGCTCA ACCTGCTCGG GCGTATTCAC
AATAAAGACG AAGCTCATAT TGCCGCCCAA AAGGCTAAAG TCTCTGGTTA CCAGAGCTTT
AACTTAGACT TGATGCACGG CCTGCCAAAC CAAAGTTTTG ATGAAGCCCT TAGCGACATA
GAGACCGCAG CAGAGCTTGC TCCGCCCCAC CTGTCTTGGT ATCAACTAAC GATTGAGCCT
AATACCCTAT TCCACTCTAA GCCGCCACAG CTTCCTGATG ATGAAAACCT ATGGCAGATC
TACGAGCAGG GGCAAAAGCG TCTAGCTGCG CTAGGTTACC AGCAGTACGA GATCTCGGCC
TATGCCAAAG AAGGCTTCCA ATGCAGACAC AACCTTAACT ACTGGCAGTT TGGCGACTAC
TTAGGGATTG GTTGTGGCGC TCATGGTAAA ATAACCCTAC TTGATGACAA TAAAATTGTC
CGCACCGTCA AGATTAAGCA CCCTAAAGGT TATTTAGCCG CTGATAACTA CACCGATGAA
ACAACAGAGG TGGTAGAGGA AGACAGAGCC TTAGAATATC TGATGAACCG CTTGCGCCTA
ATGAGTCCAA TTCCTAAGGT GGAATTTGAA CAGCGCACAG GTTTAACTCG AGACACCATC
AGTGACGGAG TTAAGCAAGG CTGTGCTAAG GGCTTAATGA CTGAATCGGA TGAACACTGG
CAGCTGACTA GCAAAGGTCA CATGTTCGTC AATGAGCTAC TGTCACAATT CCTATAG
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| Protein sequence | MLTLPPLSLY IHIPWCVQKC PYCDFNSHGQ HGELPQTEYI DALIKDLKQD LHYVQGRRLD
TIFIGGGTPS LFDAAQIGRL LAEVDKLVPF SDNIEITMEA NPGTLEHDDF EAYCKAGVTR
LSIGVQSFSS DKLNLLGRIH NKDEAHIAAQ KAKVSGYQSF NLDLMHGLPN QSFDEALSDI
ETAAELAPPH LSWYQLTIEP NTLFHSKPPQ LPDDENLWQI YEQGQKRLAA LGYQQYEISA
YAKEGFQCRH NLNYWQFGDY LGIGCGAHGK ITLLDDNKIV RTVKIKHPKG YLAADNYTDE
TTEVVEEDRA LEYLMNRLRL MSPIPKVEFE QRTGLTRDTI SDGVKQGCAK GLMTESDEHW
QLTSKGHMFV NELLSQFL
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