Gene Spea_1120 details

Gene Information

• Locus tag: Spea_1120
• ID: 5661519
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella pealeana ATCC 700345
• Kingdom: Bacteria
• Replicon accession: NC_009901
• Strand: -
• Start bp: 1358352
• End bp: 1360235
• Gene Length: 1884 bp
• Protein Length: 627 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 641235672
• Product: hypothetical protein
• Protein accession: YP_001500982
• Protein GI: 157960948
• COG category: [S] Function unknown
• COG ID: [COG4805] Uncharacterized protein conserved in bacteria

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.235834
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCTATAA AAACAAAAGT TAGCCTTATT GCCCTCTCGC TCTCATTTGG GCTCAGCGCC 
AGCACTATGC TTGGCGCCTC CGCCGTCGCC GCCCCAACTT CCACTTCACT ATCTAGCCCA 
AGTGAGCCCG TTGCCCATAA GGCAGAGAGT GAGTCAGAAA AAGCCAACGC CTTATTCGAA 
AGCATTTTCA TGGAAAATGT CATGGCAAGC CCCATCTCCC AAACCCATCT CGGCATTAAA 
ACCGATTACG ATAAATGGGA TGAGATGGGC GATACTGCCG ATGATGCCGC CCTTGCCCGC 
GACAAAAAAC ATTTAGCTCA GCTTCAAAAA ATCAACTCAA GCAAGCTCGA TAGACAAACT 
CTACTTAGCT ACCAACTACT AACGCAAAAG CTTCAGCAAG CCATTAAAGA CGATAAATGG 
CGTTACCATA GCTACCCCGT TAACCAGATG TATGGCGGCC ACTCGCAAAT AGCTTCGTTT 
CTGATAAACC AGCACCAAAT TGGTAATGTC GAAGATGCCA AGGCCTATAT AAGCCGCTTG 
CAAGGCGTGC CTAAACGTTT ATCTCAGCTA CAAACTGCAT TAGAAGTGCG TGAAAGCAAA 
GGCATTATCG CACCTAAGTT TGTCTTTCCT TACGTGATCA ACGACAGCAA GAACATAGTT 
GCAGGCGCAC CATTTACAGC AAATTCGGCG ACTAATGAAA GAGTAAAAGA CAGCGCTCTT 
TGGGCCGACT TTAAGCGTAA AATGGCAAAA CTTGAAATCA GCGATAGCGA CAAGGAAAGC 
TTATTACGTG AGGCTAAAAG CGCATTAGTA ACAGATGTAA AACCTGCCTA CGACAAGCTC 
ATCGCCTATA TGACCAAGCT TGAAACTAAA GCCGATACCC GCGATGGCGC CTGGAAATTC 
CCTCAAGGTG ACTCGTATTA CAACAACGCA CTCGCACGCA CGACAACAAC CGATATGAGC 
GCCAGTGAAA TCCATGAACT TGGCTTATCG GAAGTGGCGC GTATTCACAG CGAGATGCGT 
GACATCATGA ACAAGGTTAA CTTCGAAGGC TCACTCGCTG AGTTCTTTAA GTTCATGCGT 
GATGACGAGC AGTTTTACTA TGCCAATGAC GATAAGGGTC GCCAAGCCTA CTTAAGTGAA 
GCCACCGCAC TTATCGACAC CATGAGCGGT CGCTTAGACG AAGTGTTCAA GGTCAAACCT 
AAGGCACCAA TGATCGTAAA ACAGGTCGAA GCCTTTAGAG AGAAGTCTGC CGGTAAGGCG 
TTTTATAGCA ACCCATCACC CGATGGCAGC CGTCCAGGCA CTTACTACGC TAACCTGTAT 
GATATGAAGG CGATGCCAAA GTATCAGATG GAAGCTCTGG CTTACCATGA AGGCACGCCG 
GGGCATCATA TGCAGATAGC AATCGCTCAA GAGCTGGAGG CTGTACCTAA GTTTCGTAAG 
TTCGGCGGTT ACACTGCATA TATTGAGGGC TGGGGTCTAT ACAGCGAGTA CTTCCCGAAG 
GAGATGGGCA TGTATTCAGA TCCCTACTCT GACTTTGGCC GCTTAGCCAT GGAGCTTTGG 
CGCGCATGCC GCTTAGTAGT CGATACAGGT ATTCATGCTA AGAAATGGAC TCGTGAAGAG 
TCCATCGAGT ACTACGTCAC TAATACGCCC AATGCTAAAT CTGACGCTAT CAAGATGGTT 
GAACGTCATA TCGTGATGCC ATCACAAGCC ACTGCCTACA AGGTGGGCAT GCTTAAGCTA 
TTGGCGCTTA GAGATAAGGC GCAGCAAGCG CTAGGCGATA AGTTTGATAT TCGTGATTTT 
CACACTATCG TACTCAAAAA TGGCCCCGTA CCATTAGATG TACTAGAAAG TGAAATCGAC 
CTGTGGATTG AGCAAAACAG CTAA 

 

Protein sequence

MPIKTKVSLI ALSLSFGLSA STMLGASAVA APTSTSLSSP SEPVAHKAES ESEKANALFE 
SIFMENVMAS PISQTHLGIK TDYDKWDEMG DTADDAALAR DKKHLAQLQK INSSKLDRQT 
LLSYQLLTQK LQQAIKDDKW RYHSYPVNQM YGGHSQIASF LINQHQIGNV EDAKAYISRL 
QGVPKRLSQL QTALEVRESK GIIAPKFVFP YVINDSKNIV AGAPFTANSA TNERVKDSAL 
WADFKRKMAK LEISDSDKES LLREAKSALV TDVKPAYDKL IAYMTKLETK ADTRDGAWKF 
PQGDSYYNNA LARTTTTDMS ASEIHELGLS EVARIHSEMR DIMNKVNFEG SLAEFFKFMR 
DDEQFYYAND DKGRQAYLSE ATALIDTMSG RLDEVFKVKP KAPMIVKQVE AFREKSAGKA 
FYSNPSPDGS RPGTYYANLY DMKAMPKYQM EALAYHEGTP GHHMQIAIAQ ELEAVPKFRK 
FGGYTAYIEG WGLYSEYFPK EMGMYSDPYS DFGRLAMELW RACRLVVDTG IHAKKWTREE 
SIEYYVTNTP NAKSDAIKMV ERHIVMPSQA TAYKVGMLKL LALRDKAQQA LGDKFDIRDF 
HTIVLKNGPV PLDVLESEID LWIEQNS