| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1108 |
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| Symbol | |
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| ID | 5661507 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 1343393 |
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| End bp | 1344457 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641235660 |
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| Product | A/G-specific adenine glycosylase |
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| Protein accession | YP_001500970 |
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| Protein GI | 157960936 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1194] A/G-specific DNA glycosylase |
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| TIGRFAM ID | [TIGR01084] A/G-specific adenine glycosylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000000562379 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAACTA CCGCCTCTTT TTCAACCCGA ATTATTACTT GGTACGACAA CTTTGGTCGT
AAACAGCTCC CTTGGCAAAT CGCTAAAACC CCATACAAAG TGTGGATTTC AGAGATCATG
CTGCAGCAGA CTCAAGTTGC CACCGTTATC CCCTATTTCG AAAAATTCAT TGCTCGATTT
CCAGATATCG ATACCTTGGC TAGTGCCGAG CAAGATGAAG TGCTGCACTA TTGGACTGGG
CTTGGGTATT ACGCACGCGC ACGTAACCTG CATAAAGCAG CCCAAACAAT GCAATCACAG
TTTAGTGGTG AGTTTCCAAC CGATTTCGAT GACGTTTTAG CGCTGCCCGG CATTGGCCGC
TCCACCGCTG GAGCGGTACT GTCTTTATCA CTGGGGCTTA ATTTCCCCAT TCTCGACGGT
AACGTTAAGC GTGTTTTGGC TCGCCACGGC GCTATCGAAG GTTGGCCTGG TAAAAAACCT
GTAGAGCAAC AACTTTGGCT ATTAACTGAA AACCTAACGC CAGCAAAAGA TATCCAAAAA
TATAACCAGG CCATGATGGA TATAGGTGCG ACAGTATGCA CCCGCTCAAA ACCCAACTGC
GCTCAATGCC CGGTCGCCAT TGACTGTAAG GCTCAGTTAA GTGGTCGTCA GAGCGAATTC
CCTGGTAAAA AACCTAAGAA AACCATTCCA GAAAAATCTG CTTGGCTGCT AGTCATTGAA
GAAAATCAGC AAGTGCAGTT AGAAAAGCGT CCTCCGGCGG GTATTTGGGG CGGGCTCTGG
TGCTTCCCGC AGTTTAGTCA GCGCCAAGAA TTAGATACTT ATATAAAAGA CAAACAGCTA
AAGGTGATCT CAGAGCTTGA ACTAACAGGA TTTAGACACA CCTTTAGCCA CTTTCACCTC
GATGTCCAGC CGGTACTCAT CCGAGCAACA GGGCATAGCG ATAACCAGAT CATGGAACAA
ACTTCCACGG TCTGGTATAA CTTAACTCAT CCACCAAAAG TTGGTTTAGC CTCGGCCACC
GAGCGAATTT TGGCCGACTT AGGTTCTGTA TTAAATAAGG AGTAA
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| Protein sequence | MKTTASFSTR IITWYDNFGR KQLPWQIAKT PYKVWISEIM LQQTQVATVI PYFEKFIARF
PDIDTLASAE QDEVLHYWTG LGYYARARNL HKAAQTMQSQ FSGEFPTDFD DVLALPGIGR
STAGAVLSLS LGLNFPILDG NVKRVLARHG AIEGWPGKKP VEQQLWLLTE NLTPAKDIQK
YNQAMMDIGA TVCTRSKPNC AQCPVAIDCK AQLSGRQSEF PGKKPKKTIP EKSAWLLVIE
ENQQVQLEKR PPAGIWGGLW CFPQFSQRQE LDTYIKDKQL KVISELELTG FRHTFSHFHL
DVQPVLIRAT GHSDNQIMEQ TSTVWYNLTH PPKVGLASAT ERILADLGSV LNKE
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