| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1086 |
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| Symbol | ispH |
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| ID | 5661485 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 1314577 |
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| End bp | 1315506 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641235632 |
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| Product | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase |
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| Protein accession | YP_001500948 |
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| Protein GI | 157960914 |
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| COG category | [I] Lipid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0761] Penicillin tolerance protein |
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| TIGRFAM ID | [TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATATTC TTCTGGCAAA TCCTCGTGGT TTTTGTGCAG GTGTTGATCG CGCCATTAGT
ATTGTTGAGC GCGCATTAGA GTTATTTTCT CCACCTATTT ATGTCAGGCA CGAAGTGGTT
CATAACCGCT ACGTGGTGCA GAACTTGAAA GAACGTGGTG CCGTGTTTGT CGAAGAGCTA
GATCAAGTAC CAGACGATAG CATCGTTATC TTTAGTGCTC ATGGTGTATC TCAAGCCGTT
CGAGCCGAAG CTAAGAGACG CGGCTTAAAG GTGTTCGATG CGACTTGTCC TCTTGTCACT
AAGGTTCATC TACAGGTCGC TCGTGCAAGC CGTAAAGGTA TTGAGTGCAT CTTAATTGGT
CATGCAGGAC ACCCTGAAGT GGAAGGCACC ATGGGTCAGT ACGACAACTC TGCTGGTGGC
GTACATTTAG TTGAGTCACC TGAAGATGTA GCAAAGCTTG TGGTCAAAGA TCCTGACAAC
CTTTGCTTTG TGACTCAAAC AACCTTATCA ATGGACGATA CCGCGGATGT GATCTCGTCT
TTACAGAAAA AGTACCCTTC AATCGAAGGG CCGCGTAAGG ATGATATCTG CTACGCGACG
CAGAACCGCC AAGACGCAGT TCGCAATGTT GCTGAAGAAG TGGAACTATT TATCGTCGTT
GGCTCCAAGA ACAGTTCTAA CTCAAATCGT CTGCGTGAGT TAGCACAGAA GAAAGGCACA
CAAGCTTTCT TAGTGGATAA TGCCGATGAC GTGGATGCCA CATGGTTTAA TGGCGTAGAA
CGCGTTGCCG TAACCGCTGG GGCATCTGCG CCAGAGGTCT TGGTTAAGCA GGTTGTCGAT
GCGATTGCTA AAATGGCACC GAGCGTAGTA ACAGAGGTCG AAGGTCAACT CGAAGATACT
GTTTTCGCGG TACCTGCTGA GCTTCGTTGA
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| Protein sequence | MNILLANPRG FCAGVDRAIS IVERALELFS PPIYVRHEVV HNRYVVQNLK ERGAVFVEEL
DQVPDDSIVI FSAHGVSQAV RAEAKRRGLK VFDATCPLVT KVHLQVARAS RKGIECILIG
HAGHPEVEGT MGQYDNSAGG VHLVESPEDV AKLVVKDPDN LCFVTQTTLS MDDTADVISS
LQKKYPSIEG PRKDDICYAT QNRQDAVRNV AEEVELFIVV GSKNSSNSNR LRELAQKKGT
QAFLVDNADD VDATWFNGVE RVAVTAGASA PEVLVKQVVD AIAKMAPSVV TEVEGQLEDT
VFAVPAELR
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