| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1082 |
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| Symbol | |
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| ID | 5661481 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 1309724 |
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| End bp | 1310659 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641235628 |
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| Product | riboflavin biosynthesis protein RibF |
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| Protein accession | YP_001500944 |
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| Protein GI | 157960910 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0196] FAD synthase |
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| TIGRFAM ID | [TIGR00083] riboflavin kinase/FMN adenylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.134006 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAATTAA TCCGCGGTAT TCATAACATT TTGCCGAAAC ATCGAGGTTG CGTATTAAGC
ATAGGCAACT TTGATGGTGT TCACCGTGGT CATGCGGAAG TGATTAATCG GTTAGTCAAG
AAAGCAGAGC ACCTAGGTTT GCCTGCCGCA GTGATGACCT TTGAGCCACA ACCGCGAGAG
TTATTTCAGG GTGAAAGTGC ACCAGCTCGT TTAAGTTTGT TGCGAGACAA GATAGTCTTG
CTCGATGAGC TAAAGATCGA CCGCTTATTG TGTGTAAACT TTAATAATAA GTTTTCCAGT
TATAGCGCTG AAGATTTTAT TGAGCAGTTA CTCGTTAAGG CTTTAGGTGT TAAGTACTTA
GTTGTTGGTG ACGATTTTTG CTTTGGTAAA CAGCGCCAAG GTAATTTTGA TATGTTACGC
AAAGCCGGTG AGAAATTCGG TTTTGCAGTG GTTAGCACTC AAAGTTTTAT TTTGGGCGAT
AAGCGTGTCA GTTCAACGGA AATCCGCAAG TTACTTGCAA AAGGCAACCT AGAGCAAGCA
AGACGATTAT TAGGGCACCC TTTCACCTTA AGTGGCAAGG TGGCTCATGG TGAGAAAATT
GGTCGAACGA TTGGTTTTCC TACTGCTAAT ATTGCTTTAA AGCGTAAAGT TACACCTGTT
CGAGGTGTAT TTGCGGTCAA GCTATATTGG GATAACAGCG ATATATATGA AGGCGTGGCT
AACGTTGGCT TTAGACCTAC GGTAAACGGC CAAGTCTGTC AGTTAGAAGT CCACCTATTT
GATTTTGACG GCGACCTTTA TGGTAAAACC GTCGAAGTGG AGTTAGTGGC AAAGATTAGA
GACGAGCAGC CATTTGGATC GTTAGATGCG CTGAAAAAAC AAATTAAAGA TGATGCCAAT
AGAGCGAAAG CCCTACTTGG TAGCGATGCA GGCTGA
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| Protein sequence | MELIRGIHNI LPKHRGCVLS IGNFDGVHRG HAEVINRLVK KAEHLGLPAA VMTFEPQPRE
LFQGESAPAR LSLLRDKIVL LDELKIDRLL CVNFNNKFSS YSAEDFIEQL LVKALGVKYL
VVGDDFCFGK QRQGNFDMLR KAGEKFGFAV VSTQSFILGD KRVSSTEIRK LLAKGNLEQA
RRLLGHPFTL SGKVAHGEKI GRTIGFPTAN IALKRKVTPV RGVFAVKLYW DNSDIYEGVA
NVGFRPTVNG QVCQLEVHLF DFDGDLYGKT VEVELVAKIR DEQPFGSLDA LKKQIKDDAN
RAKALLGSDA G
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