| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1077 |
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| Symbol | |
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| ID | 5661476 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 1303980 |
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| End bp | 1305461 |
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| Gene Length | 1482 bp |
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| Protein Length | 493 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641235623 |
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| Product | amino acid carrier protein |
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| Protein accession | YP_001500939 |
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| Protein GI | 157960905 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1115] Na+/alanine symporter |
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| TIGRFAM ID | [TIGR00835] amino acid carrier protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.282227 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAGAAA CAACGGTTAA TTTTCTCAAT GCGCTGCTTT GGGGAAAACT ATTAGTATAT
GGTCTGGTTG GTGCTGGACT GTACTTTACA ATTCGACTGG CATTTATTCA GCTTACTCAT
TTTAAGCATT CTGGCGAAAT CATGCTTAAG AGTCGTCAAG GCGGCGGACG AAGCGGCCTT
TCTTCTTTCC AGGTTTTCTG TACCAGTATG GCGGCTCGTG TTGGCGCTGG TAATATGGCC
GGTGTGGCGG TTGCGATTAC AGCGGCAGGC CCAGGTGCAG TATTCTGGAT GTGGCTTATT
GCCATCCTAG GTATGGCAAC GGCAATGGTT GAGTCAACAT TGGCGCAGGT TTATAAAGTA
CGCGATCAAG ACGGGCAATA CCGCGGTGGC CCTTCCTATT ACATGGAAAA GGGCCTTGGT
CAGCGTTGGA TGGGAATTTT ATTCTCAATC TTCTTGATCA TTGCTTTCGG CCTAGTGTTT
AACGCTGTTC AAGCCAATAC CATTACTGGT GCAATGACTC AGGTCTTTAA TTTAGATGCG
ACTTACGTCG GCATCGCAAT TGTGATCCTC AGTGCCTTTG TGATTATGGG CGGCTTAAAT
AAAGTGGCTA AGGTATCGGA AATCGTCGTT CCGATTATGG CTATTGCCTA TATCTTGATC
GCTTTTGTTG TTGTGGCAAT GAACATCGAG AAGCTTCCTG ATGTATTTAT GCTGGTGATA
AAGAGTGCGT TCGGTCTGCA AGAAGCCGTT GCAGGTGGTG TGGCATATAC TATCGCTCAA
GCGATGCAAG CTGGTATCGC TCGAGGTTTA TTCTCTAACG AAGCGGGTAT GGGTAGCGCG
GCAAACGTCG CAGCGAGTGC ATCGCCAAAT CCAAATCATC CAGCGTCGCA AGGCTTTGTA
CAGATGATGG GTGTTTTTGT CGATACCATA GTTATCTGTA CAGCAACAGC GGCAATTATT
TTATTGGCGG GTGACTTAGG TTCAGACGGT GATGGCATTA AGCTAACCAT CGAGGCATTG
ACACAACACG TTGGACCTTG GGGTGGTGGA TTTGTTGCAT TAGCAATTTT GCTATTCTGC
TTTACCTCTA TCATTGCTAA CTACTCTTAT GCTGAAACCA ACGTAATGTA CTTGTCGGGT
AACAGCAAGA AAGCACTGCC TATCTTTAGA GTGTGCGTTT TAGGTATGGT GATGTTCGGT
GCTGTAGCTA AGATTGGTCT AGTGTGGAAC TTAGCCGATG TGTCTATGGG CCTAATGGCG
ACTGTGAACA TTATTGCCTT ATTACTGCTG TCTGGTTTAG CGATTAGAGT GATTAACGAT
TATCGTCAAC AATTAAAAAG TGGCGAAACT CCAACCTTCG ATGCAAGCAA GTTCCCTGAG
CTATCTAATT TAGAAGGTGG GATCTGGACC AGCAAAACCG TTGAAGAAGA AGCCAAGGCT
CAGGCTAAGG CCGAAGCGAA AGCAGAAGCT GCTGGCGCTT AA
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| Protein sequence | MIETTVNFLN ALLWGKLLVY GLVGAGLYFT IRLAFIQLTH FKHSGEIMLK SRQGGGRSGL
SSFQVFCTSM AARVGAGNMA GVAVAITAAG PGAVFWMWLI AILGMATAMV ESTLAQVYKV
RDQDGQYRGG PSYYMEKGLG QRWMGILFSI FLIIAFGLVF NAVQANTITG AMTQVFNLDA
TYVGIAIVIL SAFVIMGGLN KVAKVSEIVV PIMAIAYILI AFVVVAMNIE KLPDVFMLVI
KSAFGLQEAV AGGVAYTIAQ AMQAGIARGL FSNEAGMGSA ANVAASASPN PNHPASQGFV
QMMGVFVDTI VICTATAAII LLAGDLGSDG DGIKLTIEAL TQHVGPWGGG FVALAILLFC
FTSIIANYSY AETNVMYLSG NSKKALPIFR VCVLGMVMFG AVAKIGLVWN LADVSMGLMA
TVNIIALLLL SGLAIRVIND YRQQLKSGET PTFDASKFPE LSNLEGGIWT SKTVEEEAKA
QAKAEAKAEA AGA
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