Gene Spea_1054 details

Gene Information

• Locus tag: Spea_1054
• Symbol: tyrA
• ID: 5661453
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella pealeana ATCC 700345
• Kingdom: Bacteria
• Replicon accession: NC_009901
• Strand: +
• Start bp: 1276112
• End bp: 1277266
• Gene Length: 1155 bp
• Protein Length: 384 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 641235600
• Product: bifunctional chorismate mutase/prephenate dehydrogenase
• Protein accession: YP_001500916
• Protein GI: 157960882
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0287] Prephenate dehydrogenase; [COG1605] Chorismate mutase
• TIGRFAM ID: [TIGR01799] chorismate mutase domain of T-protein

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.189276
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAAGAAA CACAGATGAA TGAGAAGACT ACCGCAGAGC TTGAAAATCT AAGAGGTTTG 
ATTGACGGTG TCGATCAGCA GTTACTGCAC CTGTTACGCA AACGATTAGA CTTGGTGGCC 
CAAGTTGGCG CGGTGAAGCA TGGTGCTGGT CTACCGATTT ATGCGCCGCA GCGTGAAGCC 
AATATGCTAG CAAAAAGACG CGAAGAAGCT AAGGCGATGA ATGTGGCGCC ACAGTTGATT 
GAAGATATCC TGCGTCGCCT TATGCGAGAG TCCTACCTTA ATGAAAAAGA TGTTGGCTTT 
AAGCAAATTA AAGCTGATCT TGGACATGTG GTGATTGTTG GTGGAGAGGG CAAACTTGGC 
GGCTTGTTTT CGCAAATGCT AACGTTATCG GGTTATGAGG TTAAATCTCT CGATAAAGAT 
GATTGGGCCA ATAGCCAGGC TATTTTCGAT GGTGCAGGTC TTGTGATTGT AACTGTGCCT 
ATCAACATCA CCTGTGATCT CATTGCAGAC AAGCTGACGA ACTTACCTGA AAATTGCATC 
TTGGCAGATC TCACATCCAT TAAAGGCGCG CCAGTTGACG CAATGCTCGC GGCGCATTCA 
GGCCCAGTGC TTGGGTTACA TCCTATGTTT GGCCCTGATG TAGGTAGTTT AGCTAAACAA 
GTTGTGGTGG TGTGTCATGG GCGTAATCCT GAGGCTTATC AATGGTTGAT TGAACAGATT 
GAAATCTGGG GTGCACGCAT TGTTGAAGCC GAGCCGAGTA AACATGATAA AGCGATGCAG 
CTGGTACAGG CGATGCGACA TTTCTCTTCC TTTGTTTACG GGTTAAACCT TTATAAAGAA 
GAAGCGGATA TCGAGTCTTT ACTGCAGTTT AGCTCACCGA TTTACCGCTT AGAGCTGGCG 
ATGGTGGGAC GCTTGTTTGC CCAAAGCCCA GAGCTTTACG CCGATATTAT TTTTGCTCAA 
GAAGAAAGCT TAGTAGCGAT TGGTGATTAC TTAGATAACT ACTCTCAGGC GCTATCTATT 
TTAAAATCGG GTAATCGCGA TGCCTTTGTG GCTCAATTTG CAGAGGTATC TAGCTGGTTT 
GGTGATTTTG CGCCGCAATT CCAAAGAGAG AGTAGGGCGA TGCTGCAATC AGTCAACGAT 
ATGAAAACGG GCTAA 

 

Protein sequence

MEETQMNEKT TAELENLRGL IDGVDQQLLH LLRKRLDLVA QVGAVKHGAG LPIYAPQREA 
NMLAKRREEA KAMNVAPQLI EDILRRLMRE SYLNEKDVGF KQIKADLGHV VIVGGEGKLG 
GLFSQMLTLS GYEVKSLDKD DWANSQAIFD GAGLVIVTVP INITCDLIAD KLTNLPENCI 
LADLTSIKGA PVDAMLAAHS GPVLGLHPMF GPDVGSLAKQ VVVVCHGRNP EAYQWLIEQI 
EIWGARIVEA EPSKHDKAMQ LVQAMRHFSS FVYGLNLYKE EADIESLLQF SSPIYRLELA 
MVGRLFAQSP ELYADIIFAQ EESLVAIGDY LDNYSQALSI LKSGNRDAFV AQFAEVSSWF 
GDFAPQFQRE SRAMLQSVND MKTG