| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1052 |
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| Symbol | rplS |
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| ID | 5661451 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 1274290 |
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| End bp | 1274643 |
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| Gene Length | 354 bp |
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| Protein Length | 117 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641235598 |
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| Product | 50S ribosomal protein L19 |
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| Protein accession | YP_001500914 |
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| Protein GI | 157960880 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0335] Ribosomal protein L19 |
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| TIGRFAM ID | [TIGR01024] ribosomal protein L19, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.000268898 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATAACA TCATCAAAAT GCTCAACGAA GAGCAAATGA AAACCGACGT ACCACAATTT
GGTGCCGGTG ATACAGTAGT TGTTAAAGTA CGTGTTGTAG AAGGCGGTAA AGAGCGTCTA
CAGGCGTTTG AAGGTATTGT AATCGCTAAG CGTAACCGCG GCGTTCACTC TGCATTCACA
GTACGTAAAA TCTCTAATGG TGAAGGTGTT GAGCGTGCGT TCCAGACTCA CAGCCCAATC
ATCTCTAGCA TCGAAGTTAA GCGTCGCGGC CGTGTTCGTC GTGCTAAGCT TTACTATCTA
CGTGAGCGTT CAGGTAAGTC TGCACGTATC CGTGAGAAGC TTGCTACTAA GTAA
|
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| Protein sequence | MNNIIKMLNE EQMKTDVPQF GAGDTVVVKV RVVEGGKERL QAFEGIVIAK RNRGVHSAFT
VRKISNGEGV ERAFQTHSPI ISSIEVKRRG RVRRAKLYYL RERSGKSARI REKLATK
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