| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1051 |
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| Symbol | trmD |
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| ID | 5661450 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 1273507 |
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| End bp | 1274253 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641235597 |
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| Product | tRNA (guanine-N(1)-)-methyltransferase |
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| Protein accession | YP_001500913 |
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| Protein GI | 157960879 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0336] tRNA-(guanine-N1)-methyltransferase |
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| TIGRFAM ID | [TIGR00088] tRNA (guanine-N1)-methyltransferase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0000285515 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTGGTTAG GGGTAGTAAC CCTGTTTCCC GAGATGTTTC GTGCCGTAAC AGACTTTGGT
GTAACGGGTC GTGCAGTTAG TAAAGGGTTA CTAGAGTTGC AAACGTGGAA TCCTCGCGAT
TTCACCCATG ATAAACATAA AACAGTGGAT GACCGCCCTT ATGGTGGTGG CCCTGGAATG
TTGATGATGG TGCAGCCTCT ACGTGATGCC ATCCATGCAG CTAAAGCTGC AGCTGGAAAA
GAGGCAAAGG TGATTTATCT TTCTCCTCAG GGCCGTAAGC TGACACAGCA AGGCGTTGAA
GAGTTAGCAA AATCATCCAG TTTGGTTCTA GTGTGTGGTC GATACGAAGG TGTTGATGAA
CGCATTATTC AAACTGAAGT GGACGAAGAG TGGTCAATAG GGGATTACGT GCTTTCGGGC
GGTGAACTCC CTGCGATGAC TCTGATTGAT TCAGTTTCAA GATTGGTTCC TGGCGTGCTA
GGAAAACAAG CTTCTGCAGA GCAGGATTCC TTCTCTGATG GATTACTGGA TTGCCCCCAC
TATACGCGTC CTGAAAGTTT GGATGGACTG GATGTTCCAG CCGTATTGCT AAGTGGCAAC
CACGAACATA TTAGACGCTG GCGTCTACAG CAAAGCCTAG GTAGGACTTT GTTGAGACGA
CCAGAATTAC TTGAAAATCT AGCTCTGACT GGCGAACAAG AGAAGCTTCT AGCTGAATTT
GTTGACAGCA TCAAACAAGA TGATTAG
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| Protein sequence | MWLGVVTLFP EMFRAVTDFG VTGRAVSKGL LELQTWNPRD FTHDKHKTVD DRPYGGGPGM
LMMVQPLRDA IHAAKAAAGK EAKVIYLSPQ GRKLTQQGVE ELAKSSSLVL VCGRYEGVDE
RIIQTEVDEE WSIGDYVLSG GELPAMTLID SVSRLVPGVL GKQASAEQDS FSDGLLDCPH
YTRPESLDGL DVPAVLLSGN HEHIRRWRLQ QSLGRTLLRR PELLENLALT GEQEKLLAEF
VDSIKQDD
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