Gene Spea_1048 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_1048 
Symbol 
ID5661447 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp1271098 
End bp1272471 
Gene Length1374 bp 
Protein Length457 aa 
Translation table11 
GC content47% 
IMG OID641235594 
Productsignal recognition particle protein 
Protein accessionYP_001500910 
Protein GI157960876 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0541] Signal recognition particle GTPase 
TIGRFAM ID[TIGR00959] signal recognition particle protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.96553e-08 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTGAGA ACTTAACTGA CAGATTGTCA CGGACTCTGA AAAATATCAG TGGCCGTGGT 
CGCTTAACGG AAGAAAACGT TAAGGAAACC TTACGCGAAG TCCGCATGGC TCTTCTTGAG
GCCGACGTTG CCTTGCCTGT GGTTCGTGAA TTCGTAAATA GCGTTAAAGA ACGCGCTGTT
GGACAAGAGG TTTCTAAAAG TCTAAGTCCA GGCCAAGCCT TTATTAAGAT CGTTCAAAGC
GAACTTGAAA ACGCCATGGG TGAAGCGAAC GAAGCTTTGG ACCTATCGGC GCAGCCACCA
GCTGTTATTA TGATGGCGGG TTTGCAAGGT GCCGGTAAAA CTACCAGTGT TGCAAAACTG
TCTAAATTCT TGCGTGAGCG CGAAAAGAAA TCAGTCCTAG TTGTATCGGC TGACGTATAC
CGTCCAGCGG CAATCAAGCA GCTAGAAACC TTAGCCGCAG AAGTTGACGT TCAATTCTTC
CCATCTGACG TTAGCCAAAA GCCAGTCGAT ATCGCCAATG CTGCGATTGC TCATGCAAAG
CTTAAGTTCA TTGATGTGGT CATTGTCGAT ACTGCAGGTC GTTTGCACGT CGATGAAGCC
ATGATGGATG AGATTAAAGA GCTTCATGCT GCAGTTAAAC CGGTTGAGAC ACTGTTTGTG
GTTGATGCCA TGACAGGTCA AGATGCGGCC AATACAGCTA AGGCCTTTAA TGAAGCGCTA
CCGCTAACCG GTGTGGTACT GACAAAAGTC GATGGTGATG CACGTGGTGG TGCGGCGCTG
TCGATTCGTC ATATTACCGG GAAACCAATT AAATTCTTAG GTGTCGGTGA AAAAACTGAC
GCACTAGAAG CGTTCCACCC AGATCGTGTT GCTTCACGTA TTCTTGGTAT GGGCGATGTG
CTTTCTCTTA TTGAAGAGGT TGAGCGCGGC GTAGACCAAG AAAAAGCCAT GAAGCTTGCG
GCTAAAGTAA AGCAAGGCGG AAATTTTGAT TTAGAAGATT TCCGTGAGCA GCTGCAGCAA
ATGAAAAACA TGGGCGGCAT GATGAACATG ATTGAAAAGC TGCCAGGTGT GGGGCAATTA
CCACCTGAGG CTTTAGCTCA AGTTCAAGAT GGCAAGATGA CAGGGCAGAT GGAAGCGATT
ATCAACTCTA TGACCCCAGG TGAGCGCCAA CGTCCAGATA TCATCAAAGG TTCGCGCAAG
CGCAGAATCG CGATGGGCAG CGGCACACAA ATTCAAGATG TGAACCGTTT ATTGAAACAG
TTTACGCAAA TGCAGAAGAT GATGAAAAAA ATGTCATCAA AAGGCGGCAT GAAAAAAATG
ATGCGTGGCA TGAGCGGTAT GCTCCCACCA GGCATGAAAA TGCCCGGCCG CTAG
 
Protein sequence
MFENLTDRLS RTLKNISGRG RLTEENVKET LREVRMALLE ADVALPVVRE FVNSVKERAV 
GQEVSKSLSP GQAFIKIVQS ELENAMGEAN EALDLSAQPP AVIMMAGLQG AGKTTSVAKL
SKFLREREKK SVLVVSADVY RPAAIKQLET LAAEVDVQFF PSDVSQKPVD IANAAIAHAK
LKFIDVVIVD TAGRLHVDEA MMDEIKELHA AVKPVETLFV VDAMTGQDAA NTAKAFNEAL
PLTGVVLTKV DGDARGGAAL SIRHITGKPI KFLGVGEKTD ALEAFHPDRV ASRILGMGDV
LSLIEEVERG VDQEKAMKLA AKVKQGGNFD LEDFREQLQQ MKNMGGMMNM IEKLPGVGQL
PPEALAQVQD GKMTGQMEAI INSMTPGERQ RPDIIKGSRK RRIAMGSGTQ IQDVNRLLKQ
FTQMQKMMKK MSSKGGMKKM MRGMSGMLPP GMKMPGR