| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1039 |
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| Symbol | |
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| ID | 5661438 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 1261937 |
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| End bp | 1262626 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641235585 |
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| Product | DNA repair protein RecO |
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| Protein accession | YP_001500901 |
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| Protein GI | 157960867 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1381] Recombinational DNA repair protein (RecF pathway) |
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| TIGRFAM ID | [TIGR00613] DNA repair protein RecO |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.109115 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAACGTG GCTACGTTCT TCATAGCAGG CATTTTCGTG ATGGTAGCGT CATCGTTAAC
TTACTGGTAG ATGGTAAGGG GCGGGTCGAT GCTGTTGCAC GCCTAGGCGG CGCTAAAAAC
TCCATTCGTA GCATTATTCA ACCTTTCCAA CCGATTATCT TTCAGTTGCA TGGCAAAACA
GATCTTAAAA ACCTCAAGCA GGTTGAAGCT GCTAGTCCCG CAGTACCGTT AACAGGCGAC
TGCTTGTATT CGGGCCTCTA TCTTAATGAG TTGTTGATCC GTTGTTTATC GGTGCAGCAC
AGCGCCGAGA ACCTCTTTTT TGATTATCAT CGCACGTTAA TCGCCATGGC GACTGAGTTT
AATCAAAGTC AATTAAGATA CTTTGAGCAT GCATTGCTGC TGGAGTTGGG AACCATGCCA
TCTCTGGATT TTGACCCGAG TGATGCGCCA ATAACGGCGA GTGGATTTTA TCGCTTAGAG
CAAGACCACG GCTTTACCCC TGTTATCGCG ACAGCCTTTA ATCAGCATAA ATTTTTTACT
GGCGAGATGT TGGTCGCTTT GAACCAGCGT ACGCTGACGA CAGAGCACTT TTTAGAAGCT
AAAAAGCTGA TGCGTCAGTT ACTCGCTCCT GTACTGGGAG ATAAGCCACT GCATTCAAGA
ACCTTGTTCG CTAAGAAACC TAAACCTTAG
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| Protein sequence | MERGYVLHSR HFRDGSVIVN LLVDGKGRVD AVARLGGAKN SIRSIIQPFQ PIIFQLHGKT
DLKNLKQVEA ASPAVPLTGD CLYSGLYLNE LLIRCLSVQH SAENLFFDYH RTLIAMATEF
NQSQLRYFEH ALLLELGTMP SLDFDPSDAP ITASGFYRLE QDHGFTPVIA TAFNQHKFFT
GEMLVALNQR TLTTEHFLEA KKLMRQLLAP VLGDKPLHSR TLFAKKPKP
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