| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1035 |
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| Symbol | |
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| ID | 5661434 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 1257261 |
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| End bp | 1259051 |
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| Gene Length | 1791 bp |
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| Protein Length | 596 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641235581 |
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| Product | GTP-binding protein LepA |
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| Protein accession | YP_001500897 |
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| Protein GI | 157960863 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0481] Membrane GTPase LepA |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR01393] GTP-binding protein LepA |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000276893 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCATA TTAGAAACTT TTCAATTATT GCCCATATTG ACCACGGCAA ATCAACACTA
TCAGATCGCC TTATTCAAGA ATGCGGTGGC TTAACCGATC GTGAAATGGC TGCGCAAGTT
CTTGACTCAA TGGATATTGA GCGTGAGCGC GGTATTACCA TCAAAGCCCA AAGTGTAACT
TTGGATTACT TAGCTAATGA TGGTGAAACC TACCAGCTAA ACTTCATTGA TACCCCTGGC
CACGTTGACT TCTCTTATGA AGTATCACGT TCGCTTGCAG CATGTGAAGG GGCATTATTG
GTTGTTGACG CTGGTCAAGG CGTTGAGGCA CAAACCCTAG CAAACTGTTA TACCGCACTT
GAGATGGATA TGGACGTTGT TCCTGTTCTG AACAAGATCG ATCTGCCGCA GGCTGATCCA
GACCGTGTAG CTGAAGAAAT TGAAGACATC GTGGGCATTG AAGCTACTGA TGCAGTTCGA
TGTTCAGCTA AAACGGGTAT CGGTATTAAA GATGTTCTTG AAGTTATCGT CGAGCAAATT
CCACCGCCAG AAGGCGATCC AGAAGGTCCA CTTCAAGCGC TGATTATCGA CTCTTGGTTC
GATAGCTACT TAGGCGTCGT GTCTCTAGTT CGTATCAAGA ACGGCATTTT GAAAAAAGGC
GACAAGTTTA AGGTTATGTC TACAGGGCAG AACTACAACG CTGATCGTGT TGGTATTTTC
ACGCCTAAGC AAACCGATAC TACCGAGCTA AAAACCGGTG AAGTAGGCTT CGTTATTGCG
GGTATTAAAG AGATTCACGG TGCACCTGTA GGTGATACCT TGACTCACTC TAAGCACGGT
GCTGAAACAC CTTTAGCAGG TTTTAAAAAG GTTAAACCAC AAGTTTATGC TGGTTTATTC
CCAATCTCTA CTGACGATTA CGAAAACTTC CGTGACGCGC TGAACAAGCT AAGCTTGAAC
GATGCATCAC TATTTTTCGA ACCAGAAACT TCATCTGCAC TAGGTTTTGG TTTCCGTATT
GGCTTCTTGG GTCTGCTCCA CATGGAGATT ATTCAAGAGC GTCTAGAGCG TGAATACAAC
TTAGAGCTAA TCACTACAGC GCCAACGGTA GTGTATGAAA TCGTTCAGAC TAATGGTGAG
ACGATCTACG TTGATAACCC ATCTGATCTG CCAGCGGTTA ACAATATCGC TGAGATGCGT
GAGCCGATTG TTGAAACCAA TATTTTGGTT CCAAAAGAAT ACTTAGGTAA CGTAATTACC
CTATGTATCG AAAAGCGTGG TGTACAAACC AATTTGGTTT ACCACGGTAA CCAAGTGGCG
TTGACCTACG AATTACCAAT GGCTGAAGTG GTCATGGATT TCTTCGACCG TCTTAAATCA
ACCAGTCGCG GTTATGCTTC TCTTGAGTAT AACTTTATCC GCTTTGAGCC TGCTGACATG
GTACGTTTAG ATATCTTGAT CAACGGTGAC AGAGTCGATG CATTGGCCAT GATTATCCAC
AAAGGATTGA TCCGCTCTAA AGGTCTAGCG CTTGTGAATA AGATGAAAGA GCTTATTCCT
CGTCAAATGT TTGATATTGC GGTACAAGCG GCGGTTGGTA GTCAGATTAT TGCGCGTTCA
TCGATTAAAG CTATGCGTAA AGACGTAACT GCTAAATGTT ACGGTGGTGA CGTATCTCGT
AAGAAGAAAC TACTGAACAA GCAGAAAGAA GGTAAGAAAC GTATGAAGCA GGTTGGTAAC
GTTGAGGTGC CTCAAGAAGC ATTCTTAGCG GTACTAAAGC TTAACGATTA A
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| Protein sequence | MKHIRNFSII AHIDHGKSTL SDRLIQECGG LTDREMAAQV LDSMDIERER GITIKAQSVT
LDYLANDGET YQLNFIDTPG HVDFSYEVSR SLAACEGALL VVDAGQGVEA QTLANCYTAL
EMDMDVVPVL NKIDLPQADP DRVAEEIEDI VGIEATDAVR CSAKTGIGIK DVLEVIVEQI
PPPEGDPEGP LQALIIDSWF DSYLGVVSLV RIKNGILKKG DKFKVMSTGQ NYNADRVGIF
TPKQTDTTEL KTGEVGFVIA GIKEIHGAPV GDTLTHSKHG AETPLAGFKK VKPQVYAGLF
PISTDDYENF RDALNKLSLN DASLFFEPET SSALGFGFRI GFLGLLHMEI IQERLEREYN
LELITTAPTV VYEIVQTNGE TIYVDNPSDL PAVNNIAEMR EPIVETNILV PKEYLGNVIT
LCIEKRGVQT NLVYHGNQVA LTYELPMAEV VMDFFDRLKS TSRGYASLEY NFIRFEPADM
VRLDILINGD RVDALAMIIH KGLIRSKGLA LVNKMKELIP RQMFDIAVQA AVGSQIIARS
SIKAMRKDVT AKCYGGDVSR KKKLLNKQKE GKKRMKQVGN VEVPQEAFLA VLKLND
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