Gene Spea_1005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_1005 
Symbol 
ID5661404 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand- 
Start bp1221568 
End bp1222272 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content48% 
IMG OID641235551 
Producthypothetical protein 
Protein accessionYP_001500867 
Protein GI157960833 
COG category 
COG ID 
TIGRFAM ID[TIGR02001] conserved hypothetical protein, proteobacterial 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.433057 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACAA CAATTAAAAA TCTTGCGCTA CTGGGTCTAA TCGCATTGCC AACAACGGCA 
ATGGCTAACG TGAGCTCAAC GATTAATGCC ACTTCTGATT ACACCTTTAA CGGTGTGAGC 
CAAACAGATA ATGGTCCCGC ACTACAGGCA AGCCTTGATT ACGCCGCCGA TGCTGGCTGG 
TATGTGGGAA CTTGGGCATC GAATGTGGAT TACGGCTCAG GTGATGACAC TTGGCTAGAG 
CTCGATTTTT ACGGCGGTAT GTTCTATCAA CTAAGCGAAA GCGTATCGCT TGATGCGGGT 
ATCGCTTACT ACACTTATCA CGGCGATTCG TTCTCAGATG AGTATCAGTA CCCAGAGGTT 
TACACTAAAT TTGGCTATGG ATCATCTGTT GGTCAAACAG AGCTCAACTT CTGGTACACA 
TGGGATTACT TCGGTGTGGA CGCGGGTCAT TACATCATGA TGGCTGCGCA CACCTTTACC 
ATAGCCGAAG GCCATGACAT TCGTATCAGC TTTGACCGTT CGACTTCTAC CGACGAGAAC 
AAGTGGTCTT GGGACGGCGA CAAAGCCTAT AACCATTATC GCGCCGAGTA CATGACTAGC 
TGGAAAGGCT TTGATTTTAA CCTAGCCGTT GAAGATACCA GCATGGACAT AGATACCGCC 
GACACACGCG CTGTACTCTC GGTTGCAAGA ACCTTTAACT TCTAA
 
Protein sequence
MKTTIKNLAL LGLIALPTTA MANVSSTINA TSDYTFNGVS QTDNGPALQA SLDYAADAGW 
YVGTWASNVD YGSGDDTWLE LDFYGGMFYQ LSESVSLDAG IAYYTYHGDS FSDEYQYPEV 
YTKFGYGSSV GQTELNFWYT WDYFGVDAGH YIMMAAHTFT IAEGHDIRIS FDRSTSTDEN 
KWSWDGDKAY NHYRAEYMTS WKGFDFNLAV EDTSMDIDTA DTRAVLSVAR TFNF