Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_1005 |
Symbol | |
ID | 5661404 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 1221568 |
End bp | 1222272 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641235551 |
Product | hypothetical protein |
Protein accession | YP_001500867 |
Protein GI | 157960833 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR02001] conserved hypothetical protein, proteobacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.433057 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAACAA CAATTAAAAA TCTTGCGCTA CTGGGTCTAA TCGCATTGCC AACAACGGCA ATGGCTAACG TGAGCTCAAC GATTAATGCC ACTTCTGATT ACACCTTTAA CGGTGTGAGC CAAACAGATA ATGGTCCCGC ACTACAGGCA AGCCTTGATT ACGCCGCCGA TGCTGGCTGG TATGTGGGAA CTTGGGCATC GAATGTGGAT TACGGCTCAG GTGATGACAC TTGGCTAGAG CTCGATTTTT ACGGCGGTAT GTTCTATCAA CTAAGCGAAA GCGTATCGCT TGATGCGGGT ATCGCTTACT ACACTTATCA CGGCGATTCG TTCTCAGATG AGTATCAGTA CCCAGAGGTT TACACTAAAT TTGGCTATGG ATCATCTGTT GGTCAAACAG AGCTCAACTT CTGGTACACA TGGGATTACT TCGGTGTGGA CGCGGGTCAT TACATCATGA TGGCTGCGCA CACCTTTACC ATAGCCGAAG GCCATGACAT TCGTATCAGC TTTGACCGTT CGACTTCTAC CGACGAGAAC AAGTGGTCTT GGGACGGCGA CAAAGCCTAT AACCATTATC GCGCCGAGTA CATGACTAGC TGGAAAGGCT TTGATTTTAA CCTAGCCGTT GAAGATACCA GCATGGACAT AGATACCGCC GACACACGCG CTGTACTCTC GGTTGCAAGA ACCTTTAACT TCTAA
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Protein sequence | MKTTIKNLAL LGLIALPTTA MANVSSTINA TSDYTFNGVS QTDNGPALQA SLDYAADAGW YVGTWASNVD YGSGDDTWLE LDFYGGMFYQ LSESVSLDAG IAYYTYHGDS FSDEYQYPEV YTKFGYGSSV GQTELNFWYT WDYFGVDAGH YIMMAAHTFT IAEGHDIRIS FDRSTSTDEN KWSWDGDKAY NHYRAEYMTS WKGFDFNLAV EDTSMDIDTA DTRAVLSVAR TFNF
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