Gene Spea_0975 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_0975 
Symbol 
ID5661374 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp1186922 
End bp1187941 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content45% 
IMG OID641235521 
Productaspartate carbamoyltransferase 
Protein accessionYP_001500837 
Protein GI157960803 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0540] Aspartate carbamoyltransferase, catalytic chain 
TIGRFAM ID[TIGR00670] aspartate carbamoyltransferase 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTCAGT TTCAAGGTTC GCACATCCTT TCGGTAAACC AACTAGACTT GGAAGCCGTT 
GAAAAAGTTT TTTCTGTTGC TACTCGCATG ACTCCCTATG CTTTACGACA AAAACGTACC
ACTGTGTTAG ATGGTGCCGT TTTGGGCAAT CTGTTTTTCG AACCAAGTAC CCGTACACGT
GTCAGCTTTG CTAGCGCCTT TAACCTACTC GGCGGTAGAG TTAACGAAAC CGTGGGTATG
GCGTCTTCGT CATTGTCTAA GGGCGAATCG CTATACGATA CCGCTCGCGT TTTATCTAGT
TACTCAGATG TGATTGCCAT GCGTCACCCA GATTCTTTCT CTGTGAGTGA ATTTGCTAAA
GGCAGCCGCG TACCGGTAAT TAACGGCGGT GATGGTTCAA ACGAGCACCC TACTCAAGCG
CTACTGGATT TATTTACCAT TCAAAAAGAG CTAGCGGCTG GCGGCCGTGA TATCAGTGGT
ATGAATATCG CCATGGTCGG CGATTTGAAA TTTGGCCGCA CCGTACACTC GCTTTCGCGT
CTGCTATGCA TGTATAAAGA TGTCAGCTTC ACACTCGTAT CACCAAAAGA GCTAGCAATG
CCTGACTCTG TGATCAATGA CATTGCAAAT GCTGGCCATA AGATCACAAT AACAGATCAA
CTTGAAGGCA ATTTAGATCG CGCAGATATA CTCTACCTGA CGCGTATTCA AGAAGAACGC
TTCCCTTCTC AAGAAGAAGC GAACAAATAC CGCGGCAAGT TCCGTTTAAA CCAAAGTATT
TATACACAGC ATTGCAAATC AAACACTGTG ATCATGCATC CATTGCCACG AGACTCACGT
GAGCAAGCAA ATGAATTGGA TAACGATCTT AACGACCATC CAAATCTGGC TATCTTTAGA
CAAGCCGATA ATGGTCTGTT GATCCGCATG GCGCTGTTTG CACTGACGTT AGGTGTTGAC
TCTCAGCTTG AGCAATACGA ACGTCCAGTT AATTGGTATT CACGAAAAGC TGATGTGTAA
 
Protein sequence
MTQFQGSHIL SVNQLDLEAV EKVFSVATRM TPYALRQKRT TVLDGAVLGN LFFEPSTRTR 
VSFASAFNLL GGRVNETVGM ASSSLSKGES LYDTARVLSS YSDVIAMRHP DSFSVSEFAK
GSRVPVINGG DGSNEHPTQA LLDLFTIQKE LAAGGRDISG MNIAMVGDLK FGRTVHSLSR
LLCMYKDVSF TLVSPKELAM PDSVINDIAN AGHKITITDQ LEGNLDRADI LYLTRIQEER
FPSQEEANKY RGKFRLNQSI YTQHCKSNTV IMHPLPRDSR EQANELDNDL NDHPNLAIFR
QADNGLLIRM ALFALTLGVD SQLEQYERPV NWYSRKADV