Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_0975 |
Symbol | |
ID | 5661374 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 1186922 |
End bp | 1187941 |
Gene Length | 1020 bp |
Protein Length | 339 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641235521 |
Product | aspartate carbamoyltransferase |
Protein accession | YP_001500837 |
Protein GI | 157960803 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0540] Aspartate carbamoyltransferase, catalytic chain |
TIGRFAM ID | [TIGR00670] aspartate carbamoyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTCAGT TTCAAGGTTC GCACATCCTT TCGGTAAACC AACTAGACTT GGAAGCCGTT GAAAAAGTTT TTTCTGTTGC TACTCGCATG ACTCCCTATG CTTTACGACA AAAACGTACC ACTGTGTTAG ATGGTGCCGT TTTGGGCAAT CTGTTTTTCG AACCAAGTAC CCGTACACGT GTCAGCTTTG CTAGCGCCTT TAACCTACTC GGCGGTAGAG TTAACGAAAC CGTGGGTATG GCGTCTTCGT CATTGTCTAA GGGCGAATCG CTATACGATA CCGCTCGCGT TTTATCTAGT TACTCAGATG TGATTGCCAT GCGTCACCCA GATTCTTTCT CTGTGAGTGA ATTTGCTAAA GGCAGCCGCG TACCGGTAAT TAACGGCGGT GATGGTTCAA ACGAGCACCC TACTCAAGCG CTACTGGATT TATTTACCAT TCAAAAAGAG CTAGCGGCTG GCGGCCGTGA TATCAGTGGT ATGAATATCG CCATGGTCGG CGATTTGAAA TTTGGCCGCA CCGTACACTC GCTTTCGCGT CTGCTATGCA TGTATAAAGA TGTCAGCTTC ACACTCGTAT CACCAAAAGA GCTAGCAATG CCTGACTCTG TGATCAATGA CATTGCAAAT GCTGGCCATA AGATCACAAT AACAGATCAA CTTGAAGGCA ATTTAGATCG CGCAGATATA CTCTACCTGA CGCGTATTCA AGAAGAACGC TTCCCTTCTC AAGAAGAAGC GAACAAATAC CGCGGCAAGT TCCGTTTAAA CCAAAGTATT TATACACAGC ATTGCAAATC AAACACTGTG ATCATGCATC CATTGCCACG AGACTCACGT GAGCAAGCAA ATGAATTGGA TAACGATCTT AACGACCATC CAAATCTGGC TATCTTTAGA CAAGCCGATA ATGGTCTGTT GATCCGCATG GCGCTGTTTG CACTGACGTT AGGTGTTGAC TCTCAGCTTG AGCAATACGA ACGTCCAGTT AATTGGTATT CACGAAAAGC TGATGTGTAA
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Protein sequence | MTQFQGSHIL SVNQLDLEAV EKVFSVATRM TPYALRQKRT TVLDGAVLGN LFFEPSTRTR VSFASAFNLL GGRVNETVGM ASSSLSKGES LYDTARVLSS YSDVIAMRHP DSFSVSEFAK GSRVPVINGG DGSNEHPTQA LLDLFTIQKE LAAGGRDISG MNIAMVGDLK FGRTVHSLSR LLCMYKDVSF TLVSPKELAM PDSVINDIAN AGHKITITDQ LEGNLDRADI LYLTRIQEER FPSQEEANKY RGKFRLNQSI YTQHCKSNTV IMHPLPRDSR EQANELDNDL NDHPNLAIFR QADNGLLIRM ALFALTLGVD SQLEQYERPV NWYSRKADV
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