| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0968 |
|---|
| Symbol | |
|---|
| ID | 5661367 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella pealeana ATCC 700345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009901 |
|---|
| Strand | + |
|---|
| Start bp | 1178635 |
|---|
| End bp | 1179468 |
|---|
| Gene Length | 834 bp |
|---|
| Protein Length | 277 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 641235514 |
|---|
| Product | rRNA (guanine-N(1)-)-methyltransferase |
|---|
| Protein accession | YP_001500830 |
|---|
| Protein GI | 157960796 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.00000000856039 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATAGTA TTTATCTTTG CCCTGTATGT CAGTCACCCT TTATGGTGCA TGAAGAGTCG
AAAGGCTTAC ACTGTGAAAA CAAGCATCAC TTTGACATCA ATGAGCAGGG CTACTGGGTG
TTTAGCCAGC CCAAAAAGCC TAAGGCAGAC TCGCGCGCGG TTATGCGTGC TAAGCGTTAT
GTGCTTGAGT CAGGGATCTA TATTCCACTA GCCCAAGCGA TTGCCAAGGT GATTGCAGAG
TTGCCTCAAG TGACTTCTGC CGATGTGTTA TCTCAGCTAG ATTTTGATTG TGGTGACGGT
TATTTCCTGC GCACGGTCAA GGGGATCTTA GCCGAGTTAA AGCCTGAGCT TGCATTAACA
CAAACAGGGA TCTGTGAGGC TGAGAATGCC ATATTTGCTG CGGCTAAAGC GGAGCCTAGC
CCTACGTATA TCGTTTCAAC GCTGAAGCAT TTACCTTTTG CCGATGAAAG TTTTGATTTG
GTCACTCTGA TCGATAAGCA ATTAAAAGGC AAAGAGTTGA CTCGTGTGTT GAAGCAAGAT
GGTGTATTGC TACAGGTGGC TGCTGGGCCA AGACATTTAT GGCAAATTCG TGAATTTATC
TACCCAGATT TATCTGAGAA ACCCGTTAGC GAGAACCTAC CGAAAGAGCT AGAGCTACTG
CATAGCGAGC GCTTATCGCT GACGGTAAGC GTATCGGGTG AGCAGGCGAT AGCTTTGCTT
GAGATGACAC CTTACGCATG GCGAGCGAAT GATAAAGTAC GACATGACAT CCAACATGCG
AAGTTCGATG CACTAGAAAT TGACTTCGTA ATTAACGTGA TGACTAGAAA ATAA
|
|---|
| Protein sequence | MNSIYLCPVC QSPFMVHEES KGLHCENKHH FDINEQGYWV FSQPKKPKAD SRAVMRAKRY
VLESGIYIPL AQAIAKVIAE LPQVTSADVL SQLDFDCGDG YFLRTVKGIL AELKPELALT
QTGICEAENA IFAAAKAEPS PTYIVSTLKH LPFADESFDL VTLIDKQLKG KELTRVLKQD
GVLLQVAAGP RHLWQIREFI YPDLSEKPVS ENLPKELELL HSERLSLTVS VSGEQAIALL
EMTPYAWRAN DKVRHDIQHA KFDALEIDFV INVMTRK
|
|---|
| |