| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0938 |
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| Symbol | |
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| ID | 5661337 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 1146278 |
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| End bp | 1147474 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641235483 |
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| Product | MerR family transcriptional regulator |
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| Protein accession | YP_001500800 |
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| Protein GI | 157960766 |
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| COG category | [H] Coenzyme transport and metabolism
[K] Transcription |
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| COG ID | [COG0789] Predicted transcriptional regulators
[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTACCGAA TTACTGAATT AGCCCAAAAA GTCGGCTTAA GCCGTTCGAC GCTTTTGTAC
TACGAAAAGT TGGGATTGAT TTCGGCACAG CGTCAAGCCA ATGGCTACCG AAGTTACTCC
GAGCAAGACG TTCAACGCTT AAAGTTATTG CAGCAGCTGC AGGCGGGGGG ATTAACCCTT
AAAGAGTGTC AGAGCTGCTT AGAAACCAGA ATCGATAGAG AGTTGTTATT AGAGCGCCTT
AAGGTGCTGG ATGAAGAAAT AGCCCAGAAA CACAAGGCGA GAGAACTGCT CGGTGCAATG
CTGGGTTTGA GTTCGATGAG AGAGTGGCAC CAAACCACTG AAAAACAGGC TCCCAATGCA
CATCTAGATT GGTTGATGAA GCAGGGCTTC GATGAAAAAC AAGCGCTAAG ACTTAAGTGG
CTATCAAAAG ATATGAATGA ACATGAGCAG TATATGGCTG ACTTTGAGCT GATTTTTACT
GGGTTAACAA GATTAGGCCC TGGTACCGAA ACAGACTCAC GAAGAGCGCT CAATGCTGTT
CAACGCCATA GGGTTAAGGC TGAGCCGCTA AACTTTGCCG GTGAGTTATT AGAGATAGCC
TGCGGTAAAG GGATCGCGAG TCGTGTGTTG GCTCAGCATT CTGAATTTGC TATCACTGCG
CTGGATAATG ATCAGTCTAG TTTGGACGCC TTGCAACAGA GTTTGCAGCC ATTAACACTA
ACTCAAAAAG TGACAACCGT GTGTGCGAGT ATGACTGAGT TGCCGTTTGA GCAGCATCAA
TTCGACGTCA TCTGGTGTGA AGGTGGCGCT TATATCATGG GAGTTGAGCA AGCTTTTAAC
GACTGGAAGT CTCTTCTCAA GCCTGAAGGC TACTTAGTCA TTAGTGATTT AGTCTGGGCT
ACAGATAAAC CTAGTGGTGA GTCGCACGAA TTCTGGCAAC AAGAGTATCC AGATATGGTC
ACTGTAAAGC AGCGCATTGA GCAGGCTAAG TTGGCAGGCT ATGAGTTGAT TGATAGCTTT
CCACTCAGTG AGCAAGCTTG GAGTGATTAT TATCAGCCGC TTCAGACTCG TATCGATGAG
TTAGCGCCTT TGATGCCGAA CTCAAAGGCG CTGTTAGACG TTAACAAAGA GCTAGAAATA
GCAGCTAAAC GGCAAGGTCA GTTCGACTAT CAAATGTTGA TCTTACAAAA GATTTAA
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| Protein sequence | MYRITELAQK VGLSRSTLLY YEKLGLISAQ RQANGYRSYS EQDVQRLKLL QQLQAGGLTL
KECQSCLETR IDRELLLERL KVLDEEIAQK HKARELLGAM LGLSSMREWH QTTEKQAPNA
HLDWLMKQGF DEKQALRLKW LSKDMNEHEQ YMADFELIFT GLTRLGPGTE TDSRRALNAV
QRHRVKAEPL NFAGELLEIA CGKGIASRVL AQHSEFAITA LDNDQSSLDA LQQSLQPLTL
TQKVTTVCAS MTELPFEQHQ FDVIWCEGGA YIMGVEQAFN DWKSLLKPEG YLVISDLVWA
TDKPSGESHE FWQQEYPDMV TVKQRIEQAK LAGYELIDSF PLSEQAWSDY YQPLQTRIDE
LAPLMPNSKA LLDVNKELEI AAKRQGQFDY QMLILQKI
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