Gene Spea_0911 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_0911 
Symbol 
ID5661310 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp1116601 
End bp1117716 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content47% 
IMG OID641235456 
Productpermease YjgP/YjgQ family protein 
Protein accessionYP_001500773 
Protein GI157960739 
COG category[R] General function prediction only 
COG ID[COG0795] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value4.66343e-09 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATTGTAT TTAGATACCT GATTCGAGAA GTTTTTAAAG CACAAATAGC GGTACTTTTA 
GTGCTGTTAG CTATTTTTAT TAGCCAACAT TTTGTGCGTG TGCTTGCTGA TGCCTCCGAT
GGCGACTTTC CTGCATCTCT TGTTATGACT CTACTCGGTC TTAACATGCC ATTTCTCACC
GTTTTAGTCT TACCGCTAAG TCTATTTTTG GGCATTTTAT TAGCCCATGG GCGTATGTAC
GCCGAAAATG AGATGGTTAT TTTTCATGGC GTCGGCATCA GCGAGTGGTA TATCACTCGG
ATCACTCTGT TGCTTGCCGT GATTAACATG GTGTTTACTG CGTTCCTGTC TATTTATGTC
GCGCCATGGG CGGAAGAGAG GCAGAATCAA GTACTGGAGC ATGCTCAGTC CGAAGCTGGA
CTTGCTGCCT TAACACAGGG CCGCTTCCAG ACTAGCCCTA ACGGCCGTGC CGTGCTGTTT
GTCGAGCGTA TTGGTCGCGA TAATCAATTA GATAAGGTGT TTGTTGCCCA ATTGCCAGAT
CCCGATGACG AAACCGGTGT GGCAAACGTA GTGGTGGCAC GTACCGGTAA AGTGGTCGAA
GATGAAATTG GCGGCCAGCG TCTACAGTTA GAAGATGGGG TGCAGTATCA GGGCAACCCT
AAGCGTGTCG ACTATCAAGT TGTTGAATTT GGTGGTTATC AGATGCAGAT TAAAGAGCAA
GCAGTAGATG AGCGTCGCCG TAAACTGTCT GCCATGCCTA TTGGTCAGCT AATGGATATC
GATAGCCCTG AAGCCACGGC TGAGTTCCAT TGGCGATTGG CGATACCACT GGCAATTCCA
CTGATGACCT TGATTGCTGT GCCTATGGCG CGAGTGAATA ACCGCCAGGG TAAGTTTGCT
AAGATGTTCC CGGCTATTTT GCTGTACTTG GGTTATTTTG GCTTGATGGT AGCGGGGCGT
AAATCACTAG AAGATGGAGT TATTCCTCAG TACTTAGGTA TGTGGTGGAT CCATGCTTCC
GCACTTGCCA TAGGTATATT GCTTTTAGGT AAAGAGCGTC CTTTAGGAGC TAAAGTTTCA
GGCCTATTTA AGCGCAATAA GGCGAGCAAA GCATGA
 
Protein sequence
MIVFRYLIRE VFKAQIAVLL VLLAIFISQH FVRVLADASD GDFPASLVMT LLGLNMPFLT 
VLVLPLSLFL GILLAHGRMY AENEMVIFHG VGISEWYITR ITLLLAVINM VFTAFLSIYV
APWAEERQNQ VLEHAQSEAG LAALTQGRFQ TSPNGRAVLF VERIGRDNQL DKVFVAQLPD
PDDETGVANV VVARTGKVVE DEIGGQRLQL EDGVQYQGNP KRVDYQVVEF GGYQMQIKEQ
AVDERRRKLS AMPIGQLMDI DSPEATAEFH WRLAIPLAIP LMTLIAVPMA RVNNRQGKFA
KMFPAILLYL GYFGLMVAGR KSLEDGVIPQ YLGMWWIHAS ALAIGILLLG KERPLGAKVS
GLFKRNKASK A