| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0909 |
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| Symbol | |
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| ID | 5661308 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 1110408 |
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| End bp | 1114409 |
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| Gene Length | 4002 bp |
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| Protein Length | 1333 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641235454 |
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| Product | Hpt sensor hybrid histidine kinase |
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| Protein accession | YP_001500771 |
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| Protein GI | 157960737 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0784] FOG: CheY-like receiver
[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.257325 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTCAAG CGCTACTGAT ACTAATTCTA TTTTCTCTGT CTTTTTCTGC GATAGCAGGT
CAAGCAAAAA ATGACACCGC CGCGGCCACT GAAGGTCGAG TGGTTAGGGT CGGCTACCCA
GCCGCGGATT GGCAGCCTTT TACTTATGTC AGTAAAGATG GAAAAGTCAT CGGCTTACTA
CCATCCATTC TGCAAGAGAT CACCATAAAT ACCGGCTACC GCACAGAGAA TGTAATCTAT
CCGAACTATG AAGAAGTTAC TCAGGCTCTA CGCCAAGGTG AAATTGACAT CATCATGGGA
GTATCAAAAA CTCCCAGCCG CTTGACTTGG CTAAGCTTTA GCTCACCACT CATGCTGGTA
CCTATTGCAG GTATCACTAA TCAGAAAAAT ATTAACAATC TATTAGAGCT AAAAGGTCAG
CGCATCGCTG CAGAAAAAGG TTTCGCGATA AATGAACAGC TTAGAAGTTC AGCCAGCCAA
GTCGAAGTTC ACAGCGCTCC CGACAGCCTC GCAGCTTATA AATCTGTTTT AACAGGAAGC
TCAGATGCAT ACATAGGTAA TGCGATTACC CTTGATTACC TGCATACCCA CCAGGATGCA
CCTAATGAAC TGTCTATACG CCTGCTGGCT GATGTGCCCT TTGAGAGATT GCACCTTGCG
AGCCAACTAA AAGACACCGA GCTCGTTAAT CAGCTAAATG AGGGGCTAAA ACAGATCCCA
AGTGAGACTT TTAAGAAACT CTATGACGCC TGGCTGACAA CCTCTCAAGT TAAATATATT
TACCAGCAAC ATAGTCTGAA CTTAACTGAA GAGGAAATCG TAACCATTAG TGAGAAGAAA
ATCATTAAGG TACTTTACTC TACAGATAAT TATCCTTATT CCTTTATCAA TGGTAAAGGT
GCAATGGATG GTATGGGTCC AGAGCTCTTA AAAATAGCAG CCCAAAAGTT AAATATAACG
ATTGAAGCCA CGCCGTTTAA TGGAAATGAT ATTGAGGGAC ATCTTGCCTC GAATAGCTTC
GAGATCATCC CATCCTATAC TTGCGACCAT AACATTTTAC AGCTTATACA CTGCACTTCG
CCTTACATAC AAGATCGCTT GATTGGGGTT GCAGCAAGTA ACTTAACCAG CGCACAACTG
GAGAACAGTA CCAAATTAGG CTTACTAAGA CGTCACAAAC AACAAATGAA TACGTCTAAG
GATTTTCCTG ATGCAGATAT CACTTATTTT GCTTCAACAA AACTGCTGAT AAACGCTGTC
ATTAAAGGTC AGATACAAGT TGGCATCATC CCTTTATCAA AGGCTAATTC TTTAGTCAGT
TCAAAGTATT TAGGTCGAAT AAATATTATC CCAAACCCTT TGGGTAAACA AACTCACCCG
GTGAGTTTTG GTGTTAATAA GAATAACCCT ATTCTGCTGT CAATCTTGAA TAAAGCAAAA
AACTCCATTC AAGAAGATGA GTTACGTACC ATCATCAATA AATGGCATGA TATCAATATC
AACAGTGACT TTACCTTTGC TAAAGTACCA AACTGGCTGC TGTTAGTGCT AGGGGGAGTT
TTCAGTACTT TTTTGGCCAT AGCTTACTCC AATAGAAAAC TAAAAAATGA AATAGCGCAG
CGGCACAGCA TCGAAAAAGA GCTAAGGTTG GTTAATAGCA ACTTTGGTGG CATAGTTGCA
CAGTTAGTAC GCTATGGCGA TGATGTTAAT GACATTTCTT GGAGCTATGT TAGCGGCAAT
ATTGAGAAAT ACTTGGGTTT GACACCGGAA CAACTCTATC AAACACCACA ACTGCTTTTA
GAGTTTTTAC AGACACACGC TGATGATCAT GAGTTTTTAA ATGATATACA GCAGTCTCAC
CTTTCTGATT CTCTCTACAC AACCCTCAAG CTTAACATTG ACGGTAAGCT CTCTTGGTTC
CAACTCACGG GAGTCTGCAC AAAAATCGAT AAGAATCGGC ATTGGACCTT CACCCTAGTC
GATATTACTT TGCTTAAGCA AAAGCAAGCT GAGCTAGATG AGGCGAGATT AATAGCAGAA
TCAGCAACCG AGGCCAAGTC TCGCTTTCTT GCCATGATGA GCCATGAGAT CCGTACGCCT
ATTAGCGGGA TCCTGAGCCT ACTGGAATTA ATGGTTCCAC ACATCAACAC ACATGAGATC
AGTGGCATAC ATAAAAATCT GACTCATTCT GGTAATAACT TGCTCAACAT CGTTAATGAT
GTTCTCGATT TCTCAAAAAT CGAAGCGGGC AAGCTCGGAT TAAGCCCCGC TGTATGCCAA
CTTAGCAGTT TTATTTGTGA ATTAGCCCAG CCTCACATTG TCCATGTCGA GCGTAAAGGT
ATTAAATTTA AGCTCTGGCT CGACCCTAAG CTAGCGTATT CACTAACCCT AGATCATTTG
CGCCTAAAAC AGGTGCTAAA CAACCTACTC AATAACGCTT CGAAGTTTAC AACCGAGGGA
GAGATCTGGT TATCGGTCGA TCTCATATCT TCAACAGACA CAGAGCAAAC TATTGGTTTT
GCCGTTACCG ATACAGGCAT AGGAATTAGT GAAAAAGATA TCACTAAACT CTTTATTCCC
TTTGAACAAG TCGATCTCAG TAGCGAGCGC CGTTTCAGCG GTACAGGTCT AGGCCTATCT
ATCTGTGAGC AGTTAGTCAA ATTGATGGGA GGAGAGATCT CTGTCACCAG TACCCAAGGC
CAAGGCAGTA CTTTTCGCTT TAGCCTGAGC TTCCCTATTG CAGCAGTTGA AGTGCCCGCT
ATTGTCAATA AGCGCTGTGG CGTAATGATG CTTGATGACA GCGACTATGA TGTGGTCTGT
GAATACCTTA GAGCCTGGCA ATCGACTCCT TATAACTTGC ATTGTATCGA CAATAAAGCC
GCCCTCGCAG CATACGCTGC CAAGGCGCAA TTGCAGGTCA TACTGTTGCC AGAAAGTTGG
TGTGAACAAC AAGCACTAAC GCCAAGTTGG GCTAAACGCA ACCTTGCTAA TGTGCAGATT
ATTCAATTTA GAAGCCAGAG TATGCTCTCA GCAACTCCAA CAGAACTTGG CTGGGTACTA
TCGGTCAACC CAATCATCCC TGAGCACTTG CTGCATCTCA TCACTAATCC AGAGGTTTTT
GAGACCAAGT ATGCAGTGAC AGAGCCTAAA GTCGAACAGC AACTCACTCG CGAGCAGGCT
ATCAGCCAAA ATAAGCTTAT TCTCGTTGCG GAAGATCACC CTATTAATCA GGATGTTATT
CAGATGCAGC TGAATAAATT AGGCTACTTT AGCGATATTT TTGACGACGG CCAGCAAGCG
TTGACGGCCT ATAAACAGAA TAAATACAAC CTCGTTTTGA CCGACTGCCA CATGCCTGAA
CTCGATGGCT ATGGTCTAGT GAGTGCCATT AGAGAGCATG AACAACAAGA AAAACTAACC
CGCCTCGCAG TTATCGCCCT CACGGCCAAT GCGATTTCGA GTGAGAAAGC CCGTTGCCAT
CAATTTGGCT TCGATGACTA CTTAATAAAA CCGGTAACCC TAGAGCAACT GCAACGAGTG
CTTAGTGAAC ACTTAGTGAT GACTCAGTCT TCCTCAAACA GTAATGAGAT GCGCACTGAT
GGGATGCTGC GTGAGCCGCC TTTACCAGCC ACTCTGACTA ACTTAGCAAT AGATCGAATA
GATGCGAGCA TGTCCAATGT TATCGATATC GATGCACTAG AAGCCAATTT CGGCGACCGA
CAGCTTTGCA TCAATTTACT GAGTAAATTT ATCATCACCA GCAAGGATGA CATTCAGCTA
CTAAGCCAAG CAATTACCGA ACAAAACTTT GAAATGACAG CCCATATTGC TCATAAGTTC
AAAGGCGCCG CTGGGGTAAT TGAGTGTGAA CGGCTCGTTG CGACTTGCTC CAACATAGAA
ACGGCGGCTT CGACTCAAGA TATTAAAGTA TTAAAGGAAT ATCTTGTACA GATAGAACAA
TTAATAGAGC AGATCTCTAA TCAGGTAAAC CAGTTAACAT GA
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| Protein sequence | MRQALLILIL FSLSFSAIAG QAKNDTAAAT EGRVVRVGYP AADWQPFTYV SKDGKVIGLL
PSILQEITIN TGYRTENVIY PNYEEVTQAL RQGEIDIIMG VSKTPSRLTW LSFSSPLMLV
PIAGITNQKN INNLLELKGQ RIAAEKGFAI NEQLRSSASQ VEVHSAPDSL AAYKSVLTGS
SDAYIGNAIT LDYLHTHQDA PNELSIRLLA DVPFERLHLA SQLKDTELVN QLNEGLKQIP
SETFKKLYDA WLTTSQVKYI YQQHSLNLTE EEIVTISEKK IIKVLYSTDN YPYSFINGKG
AMDGMGPELL KIAAQKLNIT IEATPFNGND IEGHLASNSF EIIPSYTCDH NILQLIHCTS
PYIQDRLIGV AASNLTSAQL ENSTKLGLLR RHKQQMNTSK DFPDADITYF ASTKLLINAV
IKGQIQVGII PLSKANSLVS SKYLGRINII PNPLGKQTHP VSFGVNKNNP ILLSILNKAK
NSIQEDELRT IINKWHDINI NSDFTFAKVP NWLLLVLGGV FSTFLAIAYS NRKLKNEIAQ
RHSIEKELRL VNSNFGGIVA QLVRYGDDVN DISWSYVSGN IEKYLGLTPE QLYQTPQLLL
EFLQTHADDH EFLNDIQQSH LSDSLYTTLK LNIDGKLSWF QLTGVCTKID KNRHWTFTLV
DITLLKQKQA ELDEARLIAE SATEAKSRFL AMMSHEIRTP ISGILSLLEL MVPHINTHEI
SGIHKNLTHS GNNLLNIVND VLDFSKIEAG KLGLSPAVCQ LSSFICELAQ PHIVHVERKG
IKFKLWLDPK LAYSLTLDHL RLKQVLNNLL NNASKFTTEG EIWLSVDLIS STDTEQTIGF
AVTDTGIGIS EKDITKLFIP FEQVDLSSER RFSGTGLGLS ICEQLVKLMG GEISVTSTQG
QGSTFRFSLS FPIAAVEVPA IVNKRCGVMM LDDSDYDVVC EYLRAWQSTP YNLHCIDNKA
ALAAYAAKAQ LQVILLPESW CEQQALTPSW AKRNLANVQI IQFRSQSMLS ATPTELGWVL
SVNPIIPEHL LHLITNPEVF ETKYAVTEPK VEQQLTREQA ISQNKLILVA EDHPINQDVI
QMQLNKLGYF SDIFDDGQQA LTAYKQNKYN LVLTDCHMPE LDGYGLVSAI REHEQQEKLT
RLAVIALTAN AISSEKARCH QFGFDDYLIK PVTLEQLQRV LSEHLVMTQS SSNSNEMRTD
GMLREPPLPA TLTNLAIDRI DASMSNVIDI DALEANFGDR QLCINLLSKF IITSKDDIQL
LSQAITEQNF EMTAHIAHKF KGAAGVIECE RLVATCSNIE TAASTQDIKV LKEYLVQIEQ
LIEQISNQVN QLT
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