| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0904 |
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| Symbol | |
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| ID | 5661303 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 1105164 |
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| End bp | 1106072 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641235449 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001500766 |
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| Protein GI | 157960732 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGATCAGA TAGGTGCGAT GAAAGCGTTT GTGCGCGTGG TGCAAACTGG CAGCTTTTCT
GCAGCGGCTC GTGAGCAAAG TAGTACTCAG GCGACAATAA GCAAGAAAGT CGCTGCGCTT
GAGAGTCTAT TAGGTGCCAA GCTACTGACT CGTAGTAGTC GTGAGCTATC GCTGACCGAA
GTTGGCGCTG TTTATTTTGA AAATTGCGTG GCGATTATCG CCGAGCTCGA TGAAGCGCAG
GCTCAGGTGC GCTCGCAGCA AGCATCGCCA AAAGGAATTC TACGCGTTGC TGCTCCTGTG
GTTTTTGGTT GCCAGTTTAT CGCGCCGATT TTGGGTGAGT TCTTGATCCG CTACCCTGAG
ATTAAAGTGG ATTTGATGCT AAGCGATAAG CATGTAGATC TGGTGGCTGA AGGGGTGGAT
CTTGCTATTC GTGCTAAGCA ACTTGAGGAT TCCTCCTTGG TTGCGAGGCA TCTATTTGAT
AATCCACTGA TCACGGTCGC ATCACCTGAA TACCTAAAAC GTTTTACTCA ACCCAAAGAA
CCTCAGGAAC TGAGAGCCCA TAACTGTATC GTCTATTCGA TGTTAAAGTC AGTCAATATT
TGGCACTTTG AACAGGCTAA GGGAGGCGGG GATAAAATTT CAGTGCCTGT GGGCGGAAAT
TGCCGTTGTG ATAACGGCGA GGCGATATTG CAGCTAGCCC TCGATGGTGT CGGCATCGCC
CAGTTGCCCA CTTGGATGGT GGATAAGCAT ATTAACCAAG GTAAGCTGCA AAGGATGATG
CCGAACTATC TATCTCACCC TTTGCCCTTC AATGCTATCT ATCCCCAAAG CCGCTATGTG
CCGTTAAAGG TACGTTGTTT TATTGACTAC CTAAAGCAAT GTTTAGCGGA AGAGCCCTGC
TACTATTAA
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| Protein sequence | MDQIGAMKAF VRVVQTGSFS AAAREQSSTQ ATISKKVAAL ESLLGAKLLT RSSRELSLTE
VGAVYFENCV AIIAELDEAQ AQVRSQQASP KGILRVAAPV VFGCQFIAPI LGEFLIRYPE
IKVDLMLSDK HVDLVAEGVD LAIRAKQLED SSLVARHLFD NPLITVASPE YLKRFTQPKE
PQELRAHNCI VYSMLKSVNI WHFEQAKGGG DKISVPVGGN CRCDNGEAIL QLALDGVGIA
QLPTWMVDKH INQGKLQRMM PNYLSHPLPF NAIYPQSRYV PLKVRCFIDY LKQCLAEEPC
YY
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