| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0901 |
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| Symbol | valS |
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| ID | 5661300 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 1100137 |
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| End bp | 1103052 |
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| Gene Length | 2916 bp |
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| Protein Length | 971 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641235446 |
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| Product | valyl-tRNA synthetase |
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| Protein accession | YP_001500763 |
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| Protein GI | 157960729 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0525] Valyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00422] valyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.174794 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAAAA CATATAACCC GCAGTCTATA GAACAGTCTC TCTACCAAAA CTGGGAAGAG
AAAGGTTACT TCAAGCCACA CGGCGATGAG TCTCAAGGCA ACTATTGCAT CATGATCCCG
CCACCAAACG TGACGGGTAG CTTACACATG GGCCACGCCT TCCAAGATAC CATCATGGAT
ACCTTAACCC GTTACCAGCG TATGAAGGGC AAGAACACCC TTTGGCAGGT CGGTACTGAC
CACGCAGGTA TCGCAACACA GATGTTGGTT GAGCGTAAAG TCGCTGCAGA AGAAGGTTTA
AGCCGCCACG ATCTTGGCCG TGAAAACTTC ATCGACCGTA TCTGGGACTG GAAAGAGCAA
TCTGGCGGCA CTATCACTAA GCAGCTACGT CGCCTTGGCG CCTCTGTAGA TTGGGATCGT
GAACGTTTCA CCATGGACGA AGGCATGTCT GATGCCGTAC AAGAAGTATT TGTACGCCTT
TACGAAGATG ACCTGATCTA CCGTGGTAAG CGCCTTGTGA ATTGGGATCC AACCCTGCAC
ACGGCTATCT CTGACTTAGA AGTTGAGAAC AAAGAAAAGC AAGGCAGCAT GTGGCACTTC
CGCTACCCGC TAGCCGATGG CGCTTTGACT GCTGACGGTA AAGACTACCT AGAAGTGGCG
ACCACACGTC CTGAAACTAT GCTTGGTGAC AGCGCCGTAG CCGTTCACCC AGACGATGAG
CGTTATCAAT CACTAATTGG TAAGTTTATT CTGCTGCCAA TCGTAAACCG TCTTATCCCA
ATTGTTGCTG ACGATTATGT GGATATCGAG TTCGGTACAG GTTGTGTGAA GATCACTCCA
GCTCACGACT TTAACGACTA TGAAGTCGGT AAGCGTCACG CACTGCCTAT GTACAACATC
TTAACTATCG ACGCATCGAT TCGTTCAAGC GCCGAAGTGG TTAATACCGA TGGTACTGCA
AACAACGACC TAGATAACAG CCTACCTGAG CGTTATGCCG GCCTTGATCG CTTCAAAGCA
CGTACAGCTA TCGTTGAAGA GTTCGAAACA CTAGGTCTAC TAGGCAAAAT CGCGCCACAC
GCATTGAAGG TACCTTACGG TGACCGCTCT GGCGTTGTGA TTGAGCCACT ACTAACAGAC
CAGTGGTATG TTGCCGTTGC GCCTATGGCT AAGACTGCGA TGGAAGCCGT TGAAAACGGT
GACATCAAGT TTGTACCACA ACAGTATGAA AACATGTACA ACTCTTGGAT GCGCGACATT
CAAGACTGGT GTATTTCACG TCAGCTTTGG TGGGGTCACC GTATCCCAGC TTGGTACGAC
GAAGCCGGTA AAGTCTATGT TGGCCGCGAT GAAGCTGAAG TACGTGCTAA GCACAAGCTT
GATGACTCAG TAGTACTTCG CCAAGACGCC GACGTACTCG ATACTTGGTT CAGTTCTGCT
CTTTGGACAT TCTCTACACT AGGCTGGCCA GAAGATACTG CCGAGCTTAA AGCCTTCCAC
CCAACAGATG TGTTGGTAAC CGGTTTTGAC ATCATCTTCT TCTGGGTTGC CCGTATGATC
ATGATGACCA TGCACTTCAT CAAAGATGAA AACGGCAAGC CACAAGTTCC GTTTAAGACG
GTTTATGTAA CGGGTCTTAT CCGTGATGAA GCTGGTAACA AGATGTCTAA GTCTAAGGGT
AACGTACTTG ACCCACTAGA CATGATTGAC GGTATCGATC TTGAGTCGCT TGTAGAAAAG
CGTACTGGCA ACATGATGCA GCCACAGCTT GCGGCTAAGA TTGAAAAGAG CACCCGTAAA
GAATTTGCCG ATGGCATTGA GCCGCACGGT ACTGACGCGC TGCGCTTTAC CCTAGCGTCT
ATGGCATCAA CTGGCCGTGA CATCAACTGG GATATGAAGC GTCTAGACGG TTACCGCAGC
TTCTGTAACA AGATCTGGAA CGCATCTCGT TACGTGTTAA TGAACACTGA AGTGCAAGCA
GAAGGTGCTA GCGACGATGC GATCGGTGAA GCACTAGATT GTGGTCAACT ACTTGTTGAT
GGCAAGCCGG GCGCAATGGA GTTATCGATT GCCGATCGCT GGATTATCGG TCTGTTCAAT
GAAACCGTTA AATCTTTTGA CGAGCACATG GCGAACTACC GTTTCGACCT AGCGGCTAAC
ACGATTTACG AGTTCACTTG GAACCAGTTC TGTGACTGGT ACTTAGAGCT GACTAAGCCT
GTAATGCAAA GTGGCACTGA TGCCCAGCTT CGTGGTACTC GCCATACTTT GGTTACTGTA
CTTGAGCAGA TGCAACGTCT AATGCACCCA ATCATGCCAT ACCTAACTGA GACTATCTGG
CAACGCATTA AGCCGCTTGC TGCAGTTGAA GGCGATAGCC TGATGCTAGC TCCATTCCCT
GAGTATCAAG CTGACAAAGT TGATAGCGAA GCGATGGAAG ATCTTGAGTG GGTTAAGCAA
GTGATTGTTG CGGTACGTAA CATCCGTGCA GAACTAAACA TCGCGCCTTC TAAGCCGCTA
AATGCCCTAC TACGTGGTGT GAGCGAGCAA GACAAGGCAC GCCTTGAAGC TAACCAAACT
TTCTTCAAGA CCCTAGCTAA GCTTGAATCT ATGACGATTC TAGCGGACGG TGAAACAGCC
CCTATGTCGA CTACACAGCT TGTAGGCAAC ATGGAGCTAT TGATCCCAAT GGCGGGTCTA
ATCGATGTGG CTAAAGAAGT CGCGCGTATC GACAAGTTAC TTGAGAAAGC TGCTGGCGAG
TACAAGCGTA TCGAAGGCAA GCTATCTAAC CAAGGCTTCG TTGCTAAAGC CCCTGCTGCC
GTGATTGAAA AAGAGCGTGC TAAGCAAGCT GAATACCAGC GCGATATGGA CAAGCTGACT
GAGCAGAAAG CTGAGCTTGC TAAGTTAGAA GGCTAA
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| Protein sequence | MEKTYNPQSI EQSLYQNWEE KGYFKPHGDE SQGNYCIMIP PPNVTGSLHM GHAFQDTIMD
TLTRYQRMKG KNTLWQVGTD HAGIATQMLV ERKVAAEEGL SRHDLGRENF IDRIWDWKEQ
SGGTITKQLR RLGASVDWDR ERFTMDEGMS DAVQEVFVRL YEDDLIYRGK RLVNWDPTLH
TAISDLEVEN KEKQGSMWHF RYPLADGALT ADGKDYLEVA TTRPETMLGD SAVAVHPDDE
RYQSLIGKFI LLPIVNRLIP IVADDYVDIE FGTGCVKITP AHDFNDYEVG KRHALPMYNI
LTIDASIRSS AEVVNTDGTA NNDLDNSLPE RYAGLDRFKA RTAIVEEFET LGLLGKIAPH
ALKVPYGDRS GVVIEPLLTD QWYVAVAPMA KTAMEAVENG DIKFVPQQYE NMYNSWMRDI
QDWCISRQLW WGHRIPAWYD EAGKVYVGRD EAEVRAKHKL DDSVVLRQDA DVLDTWFSSA
LWTFSTLGWP EDTAELKAFH PTDVLVTGFD IIFFWVARMI MMTMHFIKDE NGKPQVPFKT
VYVTGLIRDE AGNKMSKSKG NVLDPLDMID GIDLESLVEK RTGNMMQPQL AAKIEKSTRK
EFADGIEPHG TDALRFTLAS MASTGRDINW DMKRLDGYRS FCNKIWNASR YVLMNTEVQA
EGASDDAIGE ALDCGQLLVD GKPGAMELSI ADRWIIGLFN ETVKSFDEHM ANYRFDLAAN
TIYEFTWNQF CDWYLELTKP VMQSGTDAQL RGTRHTLVTV LEQMQRLMHP IMPYLTETIW
QRIKPLAAVE GDSLMLAPFP EYQADKVDSE AMEDLEWVKQ VIVAVRNIRA ELNIAPSKPL
NALLRGVSEQ DKARLEANQT FFKTLAKLES MTILADGETA PMSTTQLVGN MELLIPMAGL
IDVAKEVARI DKLLEKAAGE YKRIEGKLSN QGFVAKAPAA VIEKERAKQA EYQRDMDKLT
EQKAELAKLE G
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