| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0894 |
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| Symbol | |
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| ID | 5661293 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 1090859 |
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| End bp | 1091755 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641235439 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001500756 |
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| Protein GI | 157960722 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATCTGA AGACGCTGCA CTATTTTACT CAAGTGGTCG ATGCCGGCGG TTTTGCTAAG
GCCAGTCGCA ATGTATTTCT AACTCAGCCA GCGCTTTCTA AGGCGATTAA AGCCTTAGAG
GAAGAGCTAG GTATGGTGCT GCTGGAGCGG GGAAAGCGAG GCACTCAAAT TAGGCTTACT
GCAGCAGGGG AGCTGGTGTA TCGCCATGCA CAGCAGTTGA TGACTCAGCG ACAATCCATG
CTATCTGAAC TTGAGGCGCT AAAAAACCTC ACTGGCGGCA CATTAAAGCT GGGTTTGGCG
CCATTAGGCA GCGCCGAGTT ATTTGCCCCT GTTATCGCTA AATTTAGGCA GCAATATCCT
AAAGTGGATA TGCAGCTGTT AGTGCGGGGC GGGGTTGAGC AGACCCTAGC GCTACAGAAA
AATGAGATTG AATTAGCGAC AGGGATCATC GCATTTGACG GCGAGTTCGA TGGGCTTAGG
ATCCGCAATG ATCCTATGGT TGTGGTCGTA CCTAAAACTC ATAGGCTAGC TGAACATAAG
GAGTTGCAGC TTAAGGACTT ACAATCTCTG GCGCAGGTGA TGTTCGAGCC TGAATATGCC
CTCTATGAGC TGATTTTAAC TGCTTGTGAT AAAGCTGGTT TTGTTCCCGC AGAAATTACC
CGAGTAAGCC ATGCTGATTT TGGTATCGCG CTGGTTGCTG CAGGCACAGG GATCATGGTG
TTGCCGCAGA TTATCGCCGA ACGTTATCGC GTCGATGCGG TGGTGAACGT GCCCCTTGCG
GCGAGTGATT TAAGATGGGA GTTGTCGCTA TTTTGGCGTA AGCAGCAAAG CCTCTCTTTT
GCGGCCAAGG CGATGATAGA GTTAGTTAAA CAGCAACTAG AGCAGGCGAG GCACTAA
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| Protein sequence | MDLKTLHYFT QVVDAGGFAK ASRNVFLTQP ALSKAIKALE EELGMVLLER GKRGTQIRLT
AAGELVYRHA QQLMTQRQSM LSELEALKNL TGGTLKLGLA PLGSAELFAP VIAKFRQQYP
KVDMQLLVRG GVEQTLALQK NEIELATGII AFDGEFDGLR IRNDPMVVVV PKTHRLAEHK
ELQLKDLQSL AQVMFEPEYA LYELILTACD KAGFVPAEIT RVSHADFGIA LVAAGTGIMV
LPQIIAERYR VDAVVNVPLA ASDLRWELSL FWRKQQSLSF AAKAMIELVK QQLEQARH
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