| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0892 |
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| Symbol | |
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| ID | 5661291 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 1089579 |
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| End bp | 1090268 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641235437 |
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| Product | LrgB family protein |
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| Protein accession | YP_001500754 |
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| Protein GI | 157960720 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1346] Putative effector of murein hydrolase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCCACT CAGTGATAGG GCTATTCTGT TTAGCCTTAA CCTTGGTCGG CTATTACGCC
AGCAAGGCTC TATATCGTCG TCAACGAAAA GTCTGGTTTG CGCCAATTAT TATTGCCCCA
GTGATAATAC TAAGCGTGGT CGTCAGCCTA AATATTACGG TAAGCGATTA CTTCAGCTAC
ACCCACTGGT TAGCCGCTAT GTTAGCCCCG GCAACCATCG CCTTTGCTGT GCCTATTTAT
CGTGAAAGAC AATTGATAAA GCAGTACCCT ATCACCCTAA GCTTTGGGGT GATCACCGGC
TTGTTATTAG GTATCGGCTC ATCTTGGTTA TTAACCCTGT GTACTAATAT GCCGTCACAG
ATCTCCCACA GCTTGATGGT GCGCTCGGTC TCGACCCCCT TTGCCATCGA AGCCACAGGT
GCCTTTGGTG GCGTCCCTGA ACTTACCGCC ATGCTAGTGC TGCTCACAGG CATTATGGGG
ATGGTAATTT GTGAACCACT ATTTAAAGTG GCTAATATTC GCAGCTCTGT GGCCAAAGGC
GTGGCATTAG GAGCATCGGC TCATGGCGCT GGCGCGGCTA AGGCCAGTGA AATAGGCAGA
CAAGAAGGGG TTATCGCCAG TCTGACCATG ATATTTACCG GTATCGCTAT GGTGTTAACT
GCGCCACTGT TCGCAGCACT AATCAGATAG
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| Protein sequence | MSHSVIGLFC LALTLVGYYA SKALYRRQRK VWFAPIIIAP VIILSVVVSL NITVSDYFSY
THWLAAMLAP ATIAFAVPIY RERQLIKQYP ITLSFGVITG LLLGIGSSWL LTLCTNMPSQ
ISHSLMVRSV STPFAIEATG AFGGVPELTA MLVLLTGIMG MVICEPLFKV ANIRSSVAKG
VALGASAHGA GAAKASEIGR QEGVIASLTM IFTGIAMVLT APLFAALIR
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