Gene Spea_0890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_0890 
Symbol 
ID5661289 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand+ 
Start bp1086771 
End bp1087370 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content45% 
IMG OID641235435 
ProductGPR1/FUN34/yaaH family protein 
Protein accessionYP_001500752 
Protein GI157960718 
COG category[S] Function unknown 
COG ID[COG1584] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.400956 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTACAC AACTAGCTAA TCCTGCTCCA TTAGGTCTAA TGGGATTCGG TATGACAACT 
GTCTTACTAA ACATCCATAA CGCAGGTTTT TTCCCAATTG ACTCTATGAT TTTGGCAATG 
GGAATTTTCT ACGGCGGTAT CGCTCAGGTT ATCGTTGGTA TCATGTGCTT TAAGCGTGGT 
GATACTTTCG GTACAACTGC ATTTACTTCT TACGGTTTAT TCTGGCTAAC CCTAGTAGGC 
CTGTTGGTTA TGCCTAAGAT GGGCTTTGCT GCAAGCCCAG CCACTTTCAT GGGTTGGTAC 
TTGCTACTAT GGGGCATGTT TACTGCTGCT CTTTTTGTTG GTTCACTACG TTACCCACGT 
GCTAAGCAAG TTGTGTTTGC ATCGTTAACG ATTCTATTCT TCCTACTTGC TGCGCGTGAT 
TTCACAGGTA GTGAGTTGAT CGGCACTATC GCTGGCTACG AAGGTATTTT CTGTGGTTTA 
AGCGCGATTT ACTTTGCTAT GGCACAAGTA TTGAACGCTG AGTTTGGTCG CGTTATTTTA 
CCAGTTGGTC CTGTTGCAGT TGCAGCATAC GAGCCAGCAG CAGAAAAACA AGCCGCTTAA
 
Protein sequence
MSTQLANPAP LGLMGFGMTT VLLNIHNAGF FPIDSMILAM GIFYGGIAQV IVGIMCFKRG 
DTFGTTAFTS YGLFWLTLVG LLVMPKMGFA ASPATFMGWY LLLWGMFTAA LFVGSLRYPR 
AKQVVFASLT ILFFLLAARD FTGSELIGTI AGYEGIFCGL SAIYFAMAQV LNAEFGRVIL 
PVGPVAVAAY EPAAEKQAA