Gene Spea_0888 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_0888 
Symbol 
ID5661287 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand+ 
Start bp1084885 
End bp1085520 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content48% 
IMG OID641235433 
Productputative transcriptional regulator 
Protein accessionYP_001500750 
Protein GI157960716 
COG category[K] Transcription 
COG ID[COG2345] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACCA GCGATAAGAT TTTGCAGATG TTAAAAACTC AAGGGGGGTT GACCGCTAAG 
TCGATTGCCA CAGAGCTGGG GCTTACCACT ATGGGGGTGC GCCAGCATTT ACAAGGCCTA 
GAAGAGTGCC GTGATGTGGT TTTTGAGGAT AGAAAGGCGA CTCGTGGTAG ACCCACACGT 
TACTGGGCAC TCACTGCGCA AAGTAATAGT CATTTCTCTG ATCGACATGA AGAACTAACG 
GTGCAGTTAA TCGACTCTGT TAAGACGGTC TTTGGTGATG GTGGCTTAGA GCAGCTTATT 
GCTCATCGTG AACAGGCGTC GTTAACACTT TATCGTGATG CGTTAATCGG CGCTGATACC 
TTGGTGGCTA AATTACAGAT CTTGGCTCAG TTACGTACAG AGGAGGGTTA TATGGCGACG 
GTAGAGCAAA CTGATAGATA CTATTGGCTA CTAGAGAATC ATTGCCCAAT CTGCGCCGCG 
GCATCGGCAT GCCTTAACTT TTGCCGCTCT GAATTGCAGC TATTTCAAAA CCTGCTGCAA 
GAGGACGCCA CGGTAAGTCG TGAAGAGCAT ATTATCGAAG GTGCGCGGCG TTGCGCCTAT 
AAAGTGCTGC CTAGCAATAA AGCGAGCGGT CAATAA
 
Protein sequence
MKTSDKILQM LKTQGGLTAK SIATELGLTT MGVRQHLQGL EECRDVVFED RKATRGRPTR 
YWALTAQSNS HFSDRHEELT VQLIDSVKTV FGDGGLEQLI AHREQASLTL YRDALIGADT 
LVAKLQILAQ LRTEEGYMAT VEQTDRYYWL LENHCPICAA ASACLNFCRS ELQLFQNLLQ 
EDATVSREEH IIEGARRCAY KVLPSNKASG Q