Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_0872 |
Symbol | |
ID | 5661271 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 1071648 |
End bp | 1072067 |
Gene Length | 420 bp |
Protein Length | 139 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641235417 |
Product | hypothetical protein |
Protein accession | YP_001500734 |
Protein GI | 157960700 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00000181159 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTTTTTAG ATTACTTTGC GTTAGGAATT ATATTTTTTG TTGCGATTTT CCTCTTCTAT GGGGTGATAG CTATTCATGA CATCCCTTAC GAGATCGCTA AGAAGCGTAA CCACCCACAG CAAGACGCCT TGCATATTGC AGGTTGGGTA AGCTTGTTTA CTTTGCATGC CATTTGGCCA TTTTTGTGGA TCTGGGCAAC CCTTTATCGT GAGGATCGCG GCTGGGGATT TCAAGAGGTG GTCGAAAAAG AGCAAATATT GGAAAGTGAG GTAAAAGGAT TGACGGAAAG CGTGAGAAAG TTAGAGCAAA GATTAGCAGA AATGGAGGCG TCTCAGTGTG GAGCCAAGCC CGTAACCTCG TCAGCCAAGA CACAAGCTCC TAATATGACT GATTCTCAAT CTGACGGCGC AGAGGTGTAA
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Protein sequence | MFLDYFALGI IFFVAIFLFY GVIAIHDIPY EIAKKRNHPQ QDALHIAGWV SLFTLHAIWP FLWIWATLYR EDRGWGFQEV VEKEQILESE VKGLTESVRK LEQRLAEMEA SQCGAKPVTS SAKTQAPNMT DSQSDGAEV
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