Gene Spea_0872 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_0872 
Symbol 
ID5661271 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp1071648 
End bp1072067 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content45% 
IMG OID641235417 
Producthypothetical protein 
Protein accessionYP_001500734 
Protein GI157960700 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000181159 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTTTTTAG ATTACTTTGC GTTAGGAATT ATATTTTTTG TTGCGATTTT CCTCTTCTAT 
GGGGTGATAG CTATTCATGA CATCCCTTAC GAGATCGCTA AGAAGCGTAA CCACCCACAG
CAAGACGCCT TGCATATTGC AGGTTGGGTA AGCTTGTTTA CTTTGCATGC CATTTGGCCA
TTTTTGTGGA TCTGGGCAAC CCTTTATCGT GAGGATCGCG GCTGGGGATT TCAAGAGGTG
GTCGAAAAAG AGCAAATATT GGAAAGTGAG GTAAAAGGAT TGACGGAAAG CGTGAGAAAG
TTAGAGCAAA GATTAGCAGA AATGGAGGCG TCTCAGTGTG GAGCCAAGCC CGTAACCTCG
TCAGCCAAGA CACAAGCTCC TAATATGACT GATTCTCAAT CTGACGGCGC AGAGGTGTAA
 
Protein sequence
MFLDYFALGI IFFVAIFLFY GVIAIHDIPY EIAKKRNHPQ QDALHIAGWV SLFTLHAIWP 
FLWIWATLYR EDRGWGFQEV VEKEQILESE VKGLTESVRK LEQRLAEMEA SQCGAKPVTS
SAKTQAPNMT DSQSDGAEV