Gene Spea_0865 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_0865 
Symbol 
ID5661264 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp1063370 
End bp1065694 
Gene Length2325 bp 
Protein Length774 aa 
Translation table11 
GC content45% 
IMG OID641235410 
Productorganic solvent tolerance protein 
Protein accessionYP_001500727 
Protein GI157960693 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1452] Organic solvent tolerance protein OstA 
TIGRFAM ID[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value6.34249e-07 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGATCC GTTATTTTCT GGCCTTGAGC CTGCTTCCCC AATTAGTCTT AGCAGACGAA 
ACCGAAACTG TAGCAGCGTC GAGCTCACAG TGCGTCGTTG TACCACCAGT AAAGCCTTAC
GTTCCACTTT ACGAGATGAA TACTCCTGCT GATCTGGAGC GGATCTATAT CAGTTCCGAC
CGCTCTGCGG CGCAGATGGG CAAACAAGCG ACCTTCAATG GTGATGTAAA CTTCAGTCAA
GGTGGTCGAA ATATCGCTGC GGATGAAGCG ATTCTAGACC AAGAGTCTGA AGAGCTGCAT
GCCAATGGCA ACCTAGTCTT CCAAGATGAG ATATTTACAG TCACCGCCGA CTCTTTAGTA
GCTAAGATGC GTAGCAACAG TGCAGTCCTA AGTGGGGCGC AATATTGGCT CACCGGACAA
CAGATCCACG GTGATGCTGA CAGGCTAGAG ATCACCAAAG AAAATAACCT GCTGCTATCT
GGCACTAACT TCACTACCTG CCCGGGCCAA GATCCTGACT GGCTGCTTGA AGCCGACCGC
ATCAAGATAG ACAGTACCGA GGAGTGGGGA GAAATTTGGG ACGCTAAGAT TAAAATTGCT
GGCGTGCCGG TTATGTATAT TCCTTACATG ACTATTCCGG TATCGGACAA ACGCAAATCT
GGCTTCTTAT TTCCATCATT TAGCACCAGC ACCACTAATG GTGTTGAGGT AGCCACACCT
TATTATTGGA ATATCGCACC AGAATATGAC TTAACGTTCA CCCCCAACTA TATGTCAGCA
CGAGGTCTAT TCACTAAGAC CGAGTTTAGA TATTTAGCCG GAGAGAAACA GCAAGGTCAA
TTAAACATTG AATACCTTGC CGATGACGAC AAGCTTGTCA ATAGCCCAGA TAGATACCTA
TATCACTGGG AGCACAGCGG CGCGATAAAT AAGAACTGGC GCGTCTTGGC AAACTATACC
GATGTCTCGG ATAACAACTA CTTTAATGAC CTAAGTTCTG ACGTTCAGCG TGCGACTGAT
AACCAACTCA CCCGCATCGG TGAAATCAGT TATTTTGAAC AAAACTGGGA TTTCAGTGCC
CGCGTACAAG ACATTAAAGT GCTTGGCGAG GAGGAGAAAC CCTATCAGGT GATGCCGCAG
TTTACCTTTA ACTACCGCGC CCCAAGCTAC TGGCACGGCC TAGATTTTAA CCTTTATAGT
GAAGCCACAA ACTTCGAGCA TCAAGATAGC GAATACTCGA CTGCGACTCG TGTTCACTTA
GAGCCAAGCA TCTCCTATCC GATCCACGGA CCAGCAGGGT CATTGACCAG TGAAGTAAAA
CTACTACAGA CCAACTACTG GCAAGATGAT AAATCAAATC TTTCCAATTC TGAGCTTTCA
GAACATGTGA ACCGTACTCT GCCACAGGTG CGTATTCATG GTCAGGTCAA TTTTGAACGC
TTTACCGACT ATTTTGACAC CAACTATCGT CAAACTCTTG AACCGCAGTT TCAATACCTT
TACGTAGGTT ACGAAGATCA ATCGGACATA GGTATTTACG ATACAGCCCT GCTGCAAGAA
GATTACAACG GCCTATTTAG GGATCGTCGT TTCTCTGGCC TTGACCGAAT AGCCGATGCT
AATCAATTTA CATTAGGTTT AACCACTAAG CTGTTTAACG AACAAAACCG TGAAGTGTTT
AAGTTCAGCT TGGGCCAGAT TATCTATTTA GAAGACAGCC GTGTTGGCAT CAATGATATC
ACAGGCAGCA ACGATACCTT TGTGCAAGAG AACACATCTA ACTCCGCGAT TGCCGCGGAA
TTGACGACCC AACTCTATTC TGACTGGTTC TTAAGTGGAT CGATTCAATA TGATGCTAAA
GAGAGCGAAA ACAAGAAGAG TGAAGTTACG GTAGACTATC GTCCAGGCAC CAATAAGCTT
TTGCAAGCTA GCTATCGTTA CGTTCCGGAT CTGCTAAATA CCAACACCAA CGAATCGGTA
GATATTAAGC AGATTGGCTT CCGTGGAGCT TGGCCAATTA ATGACAGTTT ATATTTGGTG
GGTAACTGGT ACTACGATCT AAATGAAAGC CGAGCGGTAG AAACCTACAC AGGTTTTCAG
TATGAATCAT GTTGCTGGGC TGTACGTTTG AGTTATCATT ACCGCATTAA GACCAATTAT
ATTGACGAAG ATAACCCGGT ACAGGATACT CGTGAGCTAT TTGAGAGCGG GATCTACCTA
AACTTTGTCT TAAAAGGACT CGGTGGTTCT GGCCCATTAG GTGTGTCAGA TATGTTGGAT
GACGGTCTAT TTAACTACCG TAAGCCACTT TATTTGAAGA ATTAG
 
Protein sequence
MQIRYFLALS LLPQLVLADE TETVAASSSQ CVVVPPVKPY VPLYEMNTPA DLERIYISSD 
RSAAQMGKQA TFNGDVNFSQ GGRNIAADEA ILDQESEELH ANGNLVFQDE IFTVTADSLV
AKMRSNSAVL SGAQYWLTGQ QIHGDADRLE ITKENNLLLS GTNFTTCPGQ DPDWLLEADR
IKIDSTEEWG EIWDAKIKIA GVPVMYIPYM TIPVSDKRKS GFLFPSFSTS TTNGVEVATP
YYWNIAPEYD LTFTPNYMSA RGLFTKTEFR YLAGEKQQGQ LNIEYLADDD KLVNSPDRYL
YHWEHSGAIN KNWRVLANYT DVSDNNYFND LSSDVQRATD NQLTRIGEIS YFEQNWDFSA
RVQDIKVLGE EEKPYQVMPQ FTFNYRAPSY WHGLDFNLYS EATNFEHQDS EYSTATRVHL
EPSISYPIHG PAGSLTSEVK LLQTNYWQDD KSNLSNSELS EHVNRTLPQV RIHGQVNFER
FTDYFDTNYR QTLEPQFQYL YVGYEDQSDI GIYDTALLQE DYNGLFRDRR FSGLDRIADA
NQFTLGLTTK LFNEQNREVF KFSLGQIIYL EDSRVGINDI TGSNDTFVQE NTSNSAIAAE
LTTQLYSDWF LSGSIQYDAK ESENKKSEVT VDYRPGTNKL LQASYRYVPD LLNTNTNESV
DIKQIGFRGA WPINDSLYLV GNWYYDLNES RAVETYTGFQ YESCCWAVRL SYHYRIKTNY
IDEDNPVQDT RELFESGIYL NFVLKGLGGS GPLGVSDMLD DGLFNYRKPL YLKN