Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_0865 |
Symbol | |
ID | 5661264 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 1063370 |
End bp | 1065694 |
Gene Length | 2325 bp |
Protein Length | 774 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641235410 |
Product | organic solvent tolerance protein |
Protein accession | YP_001500727 |
Protein GI | 157960693 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1452] Organic solvent tolerance protein OstA |
TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000634249 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCAGATCC GTTATTTTCT GGCCTTGAGC CTGCTTCCCC AATTAGTCTT AGCAGACGAA ACCGAAACTG TAGCAGCGTC GAGCTCACAG TGCGTCGTTG TACCACCAGT AAAGCCTTAC GTTCCACTTT ACGAGATGAA TACTCCTGCT GATCTGGAGC GGATCTATAT CAGTTCCGAC CGCTCTGCGG CGCAGATGGG CAAACAAGCG ACCTTCAATG GTGATGTAAA CTTCAGTCAA GGTGGTCGAA ATATCGCTGC GGATGAAGCG ATTCTAGACC AAGAGTCTGA AGAGCTGCAT GCCAATGGCA ACCTAGTCTT CCAAGATGAG ATATTTACAG TCACCGCCGA CTCTTTAGTA GCTAAGATGC GTAGCAACAG TGCAGTCCTA AGTGGGGCGC AATATTGGCT CACCGGACAA CAGATCCACG GTGATGCTGA CAGGCTAGAG ATCACCAAAG AAAATAACCT GCTGCTATCT GGCACTAACT TCACTACCTG CCCGGGCCAA GATCCTGACT GGCTGCTTGA AGCCGACCGC ATCAAGATAG ACAGTACCGA GGAGTGGGGA GAAATTTGGG ACGCTAAGAT TAAAATTGCT GGCGTGCCGG TTATGTATAT TCCTTACATG ACTATTCCGG TATCGGACAA ACGCAAATCT GGCTTCTTAT TTCCATCATT TAGCACCAGC ACCACTAATG GTGTTGAGGT AGCCACACCT TATTATTGGA ATATCGCACC AGAATATGAC TTAACGTTCA CCCCCAACTA TATGTCAGCA CGAGGTCTAT TCACTAAGAC CGAGTTTAGA TATTTAGCCG GAGAGAAACA GCAAGGTCAA TTAAACATTG AATACCTTGC CGATGACGAC AAGCTTGTCA ATAGCCCAGA TAGATACCTA TATCACTGGG AGCACAGCGG CGCGATAAAT AAGAACTGGC GCGTCTTGGC AAACTATACC GATGTCTCGG ATAACAACTA CTTTAATGAC CTAAGTTCTG ACGTTCAGCG TGCGACTGAT AACCAACTCA CCCGCATCGG TGAAATCAGT TATTTTGAAC AAAACTGGGA TTTCAGTGCC CGCGTACAAG ACATTAAAGT GCTTGGCGAG GAGGAGAAAC CCTATCAGGT GATGCCGCAG TTTACCTTTA ACTACCGCGC CCCAAGCTAC TGGCACGGCC TAGATTTTAA CCTTTATAGT GAAGCCACAA ACTTCGAGCA TCAAGATAGC GAATACTCGA CTGCGACTCG TGTTCACTTA GAGCCAAGCA TCTCCTATCC GATCCACGGA CCAGCAGGGT CATTGACCAG TGAAGTAAAA CTACTACAGA CCAACTACTG GCAAGATGAT AAATCAAATC TTTCCAATTC TGAGCTTTCA GAACATGTGA ACCGTACTCT GCCACAGGTG CGTATTCATG GTCAGGTCAA TTTTGAACGC TTTACCGACT ATTTTGACAC CAACTATCGT CAAACTCTTG AACCGCAGTT TCAATACCTT TACGTAGGTT ACGAAGATCA ATCGGACATA GGTATTTACG ATACAGCCCT GCTGCAAGAA GATTACAACG GCCTATTTAG GGATCGTCGT TTCTCTGGCC TTGACCGAAT AGCCGATGCT AATCAATTTA CATTAGGTTT AACCACTAAG CTGTTTAACG AACAAAACCG TGAAGTGTTT AAGTTCAGCT TGGGCCAGAT TATCTATTTA GAAGACAGCC GTGTTGGCAT CAATGATATC ACAGGCAGCA ACGATACCTT TGTGCAAGAG AACACATCTA ACTCCGCGAT TGCCGCGGAA TTGACGACCC AACTCTATTC TGACTGGTTC TTAAGTGGAT CGATTCAATA TGATGCTAAA GAGAGCGAAA ACAAGAAGAG TGAAGTTACG GTAGACTATC GTCCAGGCAC CAATAAGCTT TTGCAAGCTA GCTATCGTTA CGTTCCGGAT CTGCTAAATA CCAACACCAA CGAATCGGTA GATATTAAGC AGATTGGCTT CCGTGGAGCT TGGCCAATTA ATGACAGTTT ATATTTGGTG GGTAACTGGT ACTACGATCT AAATGAAAGC CGAGCGGTAG AAACCTACAC AGGTTTTCAG TATGAATCAT GTTGCTGGGC TGTACGTTTG AGTTATCATT ACCGCATTAA GACCAATTAT ATTGACGAAG ATAACCCGGT ACAGGATACT CGTGAGCTAT TTGAGAGCGG GATCTACCTA AACTTTGTCT TAAAAGGACT CGGTGGTTCT GGCCCATTAG GTGTGTCAGA TATGTTGGAT GACGGTCTAT TTAACTACCG TAAGCCACTT TATTTGAAGA ATTAG
|
Protein sequence | MQIRYFLALS LLPQLVLADE TETVAASSSQ CVVVPPVKPY VPLYEMNTPA DLERIYISSD RSAAQMGKQA TFNGDVNFSQ GGRNIAADEA ILDQESEELH ANGNLVFQDE IFTVTADSLV AKMRSNSAVL SGAQYWLTGQ QIHGDADRLE ITKENNLLLS GTNFTTCPGQ DPDWLLEADR IKIDSTEEWG EIWDAKIKIA GVPVMYIPYM TIPVSDKRKS GFLFPSFSTS TTNGVEVATP YYWNIAPEYD LTFTPNYMSA RGLFTKTEFR YLAGEKQQGQ LNIEYLADDD KLVNSPDRYL YHWEHSGAIN KNWRVLANYT DVSDNNYFND LSSDVQRATD NQLTRIGEIS YFEQNWDFSA RVQDIKVLGE EEKPYQVMPQ FTFNYRAPSY WHGLDFNLYS EATNFEHQDS EYSTATRVHL EPSISYPIHG PAGSLTSEVK LLQTNYWQDD KSNLSNSELS EHVNRTLPQV RIHGQVNFER FTDYFDTNYR QTLEPQFQYL YVGYEDQSDI GIYDTALLQE DYNGLFRDRR FSGLDRIADA NQFTLGLTTK LFNEQNREVF KFSLGQIIYL EDSRVGINDI TGSNDTFVQE NTSNSAIAAE LTTQLYSDWF LSGSIQYDAK ESENKKSEVT VDYRPGTNKL LQASYRYVPD LLNTNTNESV DIKQIGFRGA WPINDSLYLV GNWYYDLNES RAVETYTGFQ YESCCWAVRL SYHYRIKTNY IDEDNPVQDT RELFESGIYL NFVLKGLGGS GPLGVSDMLD DGLFNYRKPL YLKN
|
| |