Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_0862 |
Symbol | ksgA |
ID | 5661261 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 1060129 |
End bp | 1060932 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641235407 |
Product | dimethyladenosine transferase |
Protein accession | YP_001500724 |
Protein GI | 157960690 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0030] Dimethyladenosine transferase (rRNA methylation) |
TIGRFAM ID | [TIGR00755] dimethyladenosine transferase |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.309143 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCAATA AAGTACATTT AGGCCACACG GCCAGAAAAC GTTTTGGACA AAACTTCTTA ACCGACGAAA ATGTGATTAA CCGCATCGTT GGAGCTATTT CACCGGATAA CGATCATGTA ATGGTCGAAA TTGGTCCGGG TCTAGCCGCG CTAACTGAGC CAGTAGCCAG CGGGATCGAC AAGCTAATTG TTGTCGAGCT CGATAAAGAT CTGGTTGAGC GTCTAAAAGA GCACCCAGTG CTTAAAGACA AGCTTGAGAT CCATCAAGGT GATGCGCTTA AGTTTGACTT CAATCAGTTA GTGCGTGAAG ACAAGCAGAT GAAGGTGTTT GGTAACCTGC CATATAACAT CTCTACACCG CTAATGTTCC ACCTATTTGA GTTTGCTCAG CATATTGAAA ACATGCACTT TATGCTGCAA AAAGAGGTCG TTCTACGCCT CTCTGCTTCA CCTGGCACTA AAGCTTATGG TCGTCTAACG GTCATGGCTC AGTACCATTG CCAAGTGATG CCAGTGCTAG AAGTGCCACC AGGATGTTTC ACTCCACCTC CAAAAGTGGA TTCGGCGGTT GTACGTTTAG TGCCATACAA AGTTAAGCCT TGGCCATGTA AAGATGTGGA CTTACTAAGA AACTTAACCA CGACGGCTTT CAACATGCGC CGTAAAACGC TGAGAAACAA CCTTAAACAG TTACTGTCTG ACGAAGACTT TGCAGTGCTG GGTATCGACG CGACACTGAG ACCGGAGCAG ATCAGTGTTG AGCAATATGT GGCTATGGCT AACCACGTAT TCGACAGAAA GTAA
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Protein sequence | MSNKVHLGHT ARKRFGQNFL TDENVINRIV GAISPDNDHV MVEIGPGLAA LTEPVASGID KLIVVELDKD LVERLKEHPV LKDKLEIHQG DALKFDFNQL VREDKQMKVF GNLPYNISTP LMFHLFEFAQ HIENMHFMLQ KEVVLRLSAS PGTKAYGRLT VMAQYHCQVM PVLEVPPGCF TPPPKVDSAV VRLVPYKVKP WPCKDVDLLR NLTTTAFNMR RKTLRNNLKQ LLSDEDFAVL GIDATLRPEQ ISVEQYVAMA NHVFDRK
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