| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0857 |
|---|
| Symbol | |
|---|
| ID | 5661256 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella pealeana ATCC 700345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009901 |
|---|
| Strand | + |
|---|
| Start bp | 1055458 |
|---|
| End bp | 1055940 |
|---|
| Gene Length | 483 bp |
|---|
| Protein Length | 160 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 641235402 |
|---|
| Product | dihydrofolate reductase |
|---|
| Protein accession | YP_001500719 |
|---|
| Protein GI | 157960685 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0262] Dihydrofolate reductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.535024 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATAG CTATGATTGC CGCGATGGCA AATAACCGCG TTATTGGTAA AGATAATCAA
ATGCCATGGC ATCTCCCAGA AGATCTACGA CACTTCAAAG CTATGACCTT AGGTAAGCCT
GTAGTTATGG GAAGAAAGAC CTATGAGTCG ATTGGTCGTC CTTTACCTGG TCGTCATAAT
ATCGTCATCA GTCGTCAAGA TAGTTTGGTT ATTGATGGGG TAACAAGGGT TAGCAGCTTT
GAGGAGGCTA AGATAGCCGC TGGCGATTGT GATGAGTTAG TGGTGATGGG CGGTGGTCAG
CTGTATGAGA TGTTACTTTC TCAGGCTGAT ATCTTATATC TCACTGAAAT TAATTTAACT
GTCGAGGGTG ATACCTATTT TCCTGAGTGG GATAATGGTA GCTGGCAAGA AGTCTCTCGG
GATGTTGCTA AAAATGACAA AGATGTTGAA TACAGCTTTA TCAAGTTGGT AAAAAAGTGT
TAA
|
|---|
| Protein sequence | MKIAMIAAMA NNRVIGKDNQ MPWHLPEDLR HFKAMTLGKP VVMGRKTYES IGRPLPGRHN
IVISRQDSLV IDGVTRVSSF EEAKIAAGDC DELVVMGGGQ LYEMLLSQAD ILYLTEINLT
VEGDTYFPEW DNGSWQEVSR DVAKNDKDVE YSFIKLVKKC
|
|---|
| |