| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0834 |
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| Symbol | |
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| ID | 5661233 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 1033956 |
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| End bp | 1035206 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641235379 |
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| Product | Rh family protein/ammonium transporter |
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| Protein accession | YP_001500696 |
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| Protein GI | 157960662 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0004] Ammonia permease |
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| TIGRFAM ID | [TIGR00836] ammonium transporter
[TIGR03644] probable ammonium transporter, marine subtype |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.809964 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATGATT TAACCAAATT GGGATTGACG GTAACTGAGT TACGCTTCGC CCTAGATACG
TTTTACTTTT TGATTTCAGG TGCACTCGTG ATGTGGATGG CGGCGGGATT TGCCATGCTT
GAGGCGGGCT TAGTGCGCTC GAAGAATACC ACAGAGATCC TAACTAAAAA TGTCTGCTTG
TATTCGATAG CTTGTGTCAT GTACCTGATT GTTGGCTATA ACATTATGTA TGTTGATAAC
GTCGAGGGAG GATGGTTTCC CTCATTTGGG TCCTTGATTG GTTCTCAGTC AGAAGGGGCC
GACCATGCAC TAGAATCTGA CTTCTTCTTT CAGGTGGTAT TTGTTGCCAC GGCAATGTCT
ATCGTATCGG GCGCGGTGGC TGAGCGCATG AAACTGTGGG CCTTCTTAAT TTTCTCAATC
TTTATGACAG CGGTGATCTA CCCGGTTGAA GGCTACTGGA CTTGGGGCGG TGGTTTCTTG
TCGACGGCTG GCTTCGTCGA TTTTGCTGGT AGTGGTATTG TGCATATGGC TGGCGCAGCT
GCAGCGATTT CAGGTGTGTT ATTACTAGGT GCTCGTAGAG GTAAATACGG CGCTAATGGT
CAAATTAATC CCATTCCAGG TTCAAACTTA CCCATGGCAA CATTAGGCAT GTTTATCTTG
TGGATGGGCT GGTTTGGTTT TAATGGCGGT TCTCAATTGC TGCTATCTGA CGCCGAAAAT
GCTAGCGCGG TGGCTAAGAT TTTTGTTAAT ACCAACTCTG CGGCGGCTTT CGGTGCGATT
TCGGCATTAA TAGTATGTCG ACTCATCTGG GGCAAGGCGG ACTTAACCAT GATCTTAAAC
GGCGCATTAG CCGGTCTGGT GGCGATCACC GCCGATCCTT TATCGCCGTC ACTAGCTATG
GCTGGGGTGA TTGGCTTGGC TGCTGGTGGT TTGGTGGTGT TCTCGATTGT GGCCTTCGAT
AGAATTAAGA TTGATGATCC TGTTGGGGCT ATCTCAGTCC ATGGTGTGGC GGGTTTATTA
GGCTTAATCT TGGTTCCAGT ATCTAACAGC GAGGCTTCGT TTTTGACTCA GCTATATGGC
GCGGCAGTGA TTTTCGCTTG GGTGTTCTTC GCCTCGGCTG CAGTATGGAT GGCACTTAAG
CTGACCATGG GGATCCGTGT TACCGAGGAA GAAGAGTATA ACGGCATGGA TGCATCCGAC
TGCGGTATCG ACGCATACCC TGAGTTTGTC TCTGTTAAGA GTGGCAGCTA G
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| Protein sequence | MDDLTKLGLT VTELRFALDT FYFLISGALV MWMAAGFAML EAGLVRSKNT TEILTKNVCL
YSIACVMYLI VGYNIMYVDN VEGGWFPSFG SLIGSQSEGA DHALESDFFF QVVFVATAMS
IVSGAVAERM KLWAFLIFSI FMTAVIYPVE GYWTWGGGFL STAGFVDFAG SGIVHMAGAA
AAISGVLLLG ARRGKYGANG QINPIPGSNL PMATLGMFIL WMGWFGFNGG SQLLLSDAEN
ASAVAKIFVN TNSAAAFGAI SALIVCRLIW GKADLTMILN GALAGLVAIT ADPLSPSLAM
AGVIGLAAGG LVVFSIVAFD RIKIDDPVGA ISVHGVAGLL GLILVPVSNS EASFLTQLYG
AAVIFAWVFF ASAAVWMALK LTMGIRVTEE EEYNGMDASD CGIDAYPEFV SVKSGS
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