Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_0824 |
Symbol | |
ID | 5661223 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 1023747 |
End bp | 1024352 |
Gene Length | 606 bp |
Protein Length | 201 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 641235369 |
Product | membrane lipoprotein lipid attachment site |
Protein accession | YP_001500686 |
Protein GI | 157960652 |
COG category | [R] General function prediction only |
COG ID | [COG3417] Collagen-binding surface adhesin SpaP (antigen I/II family) |
TIGRFAM ID | [TIGR02722] uncharacterized proteobacterial lipoprotein |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.525373 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAACTTA CTATGAAACA ATTTAAAGTC ATTTTTATTC TTGCAGCAGT TATCGGTTTA TCTGCCTGCC AATCAAAAGT TGAATACGGT GATGCCACAG AAGTGGAAAC CGTTAACGAG AACTTCGGCT CAACCGATCT TCAAGCTATA GCCGCTAAGA TGGTCGACAG CATGCTGACC TTCCCACCCG TTGTGGCGAT GACAGCCAAT GACCGCCCAA TTATTTTTGT CGATAAGATC AAGAACAAAA CCTCTGAGCA TATCGATACA GAATCAGTTA CCGATTCAAT CAGCAACAAG CTACTACGCT CAGGTAAATT CCGCTTTATC GATATGACCA AAGTGGATTC AGTTCGTAAG CAGCTAGATT ACCAGAACAA CTCAGGCATG GTTGATCCAT CGACTGCAAT TAACTTCGGT CGTCAAATTG GTGCCCAGTT CATGCTATAC GGCAACCTGT CTAGCATCGT TAAGCAAGAT GGCAGCACTA AAGACGTTTA CTACAAGATG ACCATGCGTT TAATGGATCT TGAAACAGGC CTAATCGAAT GGTCTGATGA GAAAGAGATC CGCAAGGTTA AGTCTAAGTC TTTCTTAGGC CTATAA
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Protein sequence | MELTMKQFKV IFILAAVIGL SACQSKVEYG DATEVETVNE NFGSTDLQAI AAKMVDSMLT FPPVVAMTAN DRPIIFVDKI KNKTSEHIDT ESVTDSISNK LLRSGKFRFI DMTKVDSVRK QLDYQNNSGM VDPSTAINFG RQIGAQFMLY GNLSSIVKQD GSTKDVYYKM TMRLMDLETG LIEWSDEKEI RKVKSKSFLG L
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