Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_0764 |
Symbol | |
ID | 5661163 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 948489 |
End bp | 950438 |
Gene Length | 1950 bp |
Protein Length | 649 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641235309 |
Product | peptidase U32 |
Protein accession | YP_001500626 |
Protein GI | 157960592 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0826] Collagenase and related proteases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCAATG TTGGCATCTA TACTCCTAGC GATAAGCCCG AAGAGACGCT TAAAGACGAG TCGCACTCTC CTGTAGAGCT GCAAAATAAC CGTCTAGAGC TATTGGCTCC GGCTAAAAAT GCCGACTTCG GTATTGAAGC TATCCGCCAT GGTGCCGATG CCGTGTATAT TGGTGGTCCC GCCTTCGGTG CCCGTGCCAC AGCCGGTAAC AGCGTCGAAG ATATCGCGCG CCTATGTAGC TTTGCTCATC AATATCACGC CCAAGTGTTT GTTGCTATCA ATACCATTTT GATGGATGAC GAACTGCAAG CGGCGCAAAA ACTTATCTGG GAAGTGTACG AGGCGGGCGC CGATGCGCTT ATCGTGCAAG ATATGGGCAT ACTGCAGCTA GATTTGCCTC CTATCGCCTT ACATGCCAGC ACACAGATGG ATAACCGTAG CCCAGAGAAA GTCGCCTTCT TAGAGCAGGT AGGTTTCTCG CAGGTGGTAC TGGCTCGTGA ACTTGGTTTA AGCCAAATTC GTGACGTTGC GGCTAACACC AATATGCAGA TTGAGTTCTT TATTCACGGC GCACTGTGTG TCGCGTTCAG TGGCCTGTGC AACTTGAGCC ACTCATTCAG TAATCGTAGC GCCAACCGCG GTGAATGCTC GCAGCTGTGT CGTTTACCTG CCGATTTAAA GACGCGACAG GGAGAAGTAC TGGCGCAAAA CGAGCACCTA TTATCCCTTA AAGATAATAA CCAGACAGAC AACTTAGAAG CCTTGATCGA CGCGGGCGTA CGCTCGTTTA AAATCGAGGG ACGTCTAAAA GATTTAAGCT ATGTTAAAAA CGTCACCGCC CATTACCGCC AAGAGTTAGA CAAGATCATC GCTCGTCGCA GTGAATTTGT CGCTTCATCC CATGGTCGCT GTGAGCATAC TTTTACGCCT GATCCTGAAA AGACCTTTAA CCGCGGCAAG ACAGATTACT TTGTCCATGA ACGCAGCCAA GGTATGAATG ACTTCCGCTC GCCAAAATAT ATTGGTGAAG AGGTCGCAAC AGTTAAGCGC ATAGGTAATG ACTATATTGA AGTGACTTCG AATGAGACCT TCAACAATGG TGACGGCTTG TGTTTCTTCC CAAGTGATTA CGCTGAAGCT AAGCAGTCCG ATGACAAGCT AAAAGGCCTG CGTGTTAATC GCGCTGAAGG TTTAAAGCTA TTTGTGCTGC GTATGCCTAA AGAGCTTAAA GTGGGCATGA CGATTTATCG TAACCATAAC CAAGCCTTTG AGACCGTGTT GGCGAAAGAG TCAGCTAAGC GCATTATCGG CGTAGACCTA GTATTAGCCG ATACCGATGA CGGTGTATCG CTTACCATGA CTGACGTTTA TGGCCACACT GCGACTCAGT CGTTGATTGT TGAGAAAACT GCAGCCACCG ATATTGAAAA AGCGCAGCAA GGCCTGCGTA AACAGCTGGC AAAGCTAGGT AGTACCGACT TTACCGCCCA TAACATCAGC ATAGAAACCG CTGAGACCTG GTTTATTCCA ACCTCAATGT TAAACGGTCT ACGCCGTGAC ACTGTTGCGG CACTAGAGCA GGCCAGAGTC GAAGGTTATC AGCGCCCTAA GGCGTGGAAG TACAACCAAG ATGCCGTCTA TCCGGTTAAG CACTTAAGCT ATTTAGGCAA CGTGGCCAAC GAACAAGCCA AGGCTTTTTA TCAGCGTCAT GGGGTGATTG AAATTCAAGA TACCTATGAG AAGAACGGGA TCAATGAAGA TGTGCCGCTG ATGGTAACTA AGCATTGTTT ACGCTTTAAC TTTAATCTTT GTCCTAAAGA GGTGCCGGGT ATTAAAGCCG ATCCTATGGT GCTGGAAATT GGTAAAGATG TATTAAAGCT AGTGTTCGAC TGTCCGAAAT GTGAAATGAT GGTTGTCGGT GAAAACAGAC AGGTTCGCAC TACTGATTAG
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Protein sequence | MSNVGIYTPS DKPEETLKDE SHSPVELQNN RLELLAPAKN ADFGIEAIRH GADAVYIGGP AFGARATAGN SVEDIARLCS FAHQYHAQVF VAINTILMDD ELQAAQKLIW EVYEAGADAL IVQDMGILQL DLPPIALHAS TQMDNRSPEK VAFLEQVGFS QVVLARELGL SQIRDVAANT NMQIEFFIHG ALCVAFSGLC NLSHSFSNRS ANRGECSQLC RLPADLKTRQ GEVLAQNEHL LSLKDNNQTD NLEALIDAGV RSFKIEGRLK DLSYVKNVTA HYRQELDKII ARRSEFVASS HGRCEHTFTP DPEKTFNRGK TDYFVHERSQ GMNDFRSPKY IGEEVATVKR IGNDYIEVTS NETFNNGDGL CFFPSDYAEA KQSDDKLKGL RVNRAEGLKL FVLRMPKELK VGMTIYRNHN QAFETVLAKE SAKRIIGVDL VLADTDDGVS LTMTDVYGHT ATQSLIVEKT AATDIEKAQQ GLRKQLAKLG STDFTAHNIS IETAETWFIP TSMLNGLRRD TVAALEQARV EGYQRPKAWK YNQDAVYPVK HLSYLGNVAN EQAKAFYQRH GVIEIQDTYE KNGINEDVPL MVTKHCLRFN FNLCPKEVPG IKADPMVLEI GKDVLKLVFD CPKCEMMVVG ENRQVRTTD
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