Gene Spea_0764 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_0764 
Symbol 
ID5661163 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp948489 
End bp950438 
Gene Length1950 bp 
Protein Length649 aa 
Translation table11 
GC content48% 
IMG OID641235309 
Productpeptidase U32 
Protein accessionYP_001500626 
Protein GI157960592 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0826] Collagenase and related proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAATG TTGGCATCTA TACTCCTAGC GATAAGCCCG AAGAGACGCT TAAAGACGAG 
TCGCACTCTC CTGTAGAGCT GCAAAATAAC CGTCTAGAGC TATTGGCTCC GGCTAAAAAT
GCCGACTTCG GTATTGAAGC TATCCGCCAT GGTGCCGATG CCGTGTATAT TGGTGGTCCC
GCCTTCGGTG CCCGTGCCAC AGCCGGTAAC AGCGTCGAAG ATATCGCGCG CCTATGTAGC
TTTGCTCATC AATATCACGC CCAAGTGTTT GTTGCTATCA ATACCATTTT GATGGATGAC
GAACTGCAAG CGGCGCAAAA ACTTATCTGG GAAGTGTACG AGGCGGGCGC CGATGCGCTT
ATCGTGCAAG ATATGGGCAT ACTGCAGCTA GATTTGCCTC CTATCGCCTT ACATGCCAGC
ACACAGATGG ATAACCGTAG CCCAGAGAAA GTCGCCTTCT TAGAGCAGGT AGGTTTCTCG
CAGGTGGTAC TGGCTCGTGA ACTTGGTTTA AGCCAAATTC GTGACGTTGC GGCTAACACC
AATATGCAGA TTGAGTTCTT TATTCACGGC GCACTGTGTG TCGCGTTCAG TGGCCTGTGC
AACTTGAGCC ACTCATTCAG TAATCGTAGC GCCAACCGCG GTGAATGCTC GCAGCTGTGT
CGTTTACCTG CCGATTTAAA GACGCGACAG GGAGAAGTAC TGGCGCAAAA CGAGCACCTA
TTATCCCTTA AAGATAATAA CCAGACAGAC AACTTAGAAG CCTTGATCGA CGCGGGCGTA
CGCTCGTTTA AAATCGAGGG ACGTCTAAAA GATTTAAGCT ATGTTAAAAA CGTCACCGCC
CATTACCGCC AAGAGTTAGA CAAGATCATC GCTCGTCGCA GTGAATTTGT CGCTTCATCC
CATGGTCGCT GTGAGCATAC TTTTACGCCT GATCCTGAAA AGACCTTTAA CCGCGGCAAG
ACAGATTACT TTGTCCATGA ACGCAGCCAA GGTATGAATG ACTTCCGCTC GCCAAAATAT
ATTGGTGAAG AGGTCGCAAC AGTTAAGCGC ATAGGTAATG ACTATATTGA AGTGACTTCG
AATGAGACCT TCAACAATGG TGACGGCTTG TGTTTCTTCC CAAGTGATTA CGCTGAAGCT
AAGCAGTCCG ATGACAAGCT AAAAGGCCTG CGTGTTAATC GCGCTGAAGG TTTAAAGCTA
TTTGTGCTGC GTATGCCTAA AGAGCTTAAA GTGGGCATGA CGATTTATCG TAACCATAAC
CAAGCCTTTG AGACCGTGTT GGCGAAAGAG TCAGCTAAGC GCATTATCGG CGTAGACCTA
GTATTAGCCG ATACCGATGA CGGTGTATCG CTTACCATGA CTGACGTTTA TGGCCACACT
GCGACTCAGT CGTTGATTGT TGAGAAAACT GCAGCCACCG ATATTGAAAA AGCGCAGCAA
GGCCTGCGTA AACAGCTGGC AAAGCTAGGT AGTACCGACT TTACCGCCCA TAACATCAGC
ATAGAAACCG CTGAGACCTG GTTTATTCCA ACCTCAATGT TAAACGGTCT ACGCCGTGAC
ACTGTTGCGG CACTAGAGCA GGCCAGAGTC GAAGGTTATC AGCGCCCTAA GGCGTGGAAG
TACAACCAAG ATGCCGTCTA TCCGGTTAAG CACTTAAGCT ATTTAGGCAA CGTGGCCAAC
GAACAAGCCA AGGCTTTTTA TCAGCGTCAT GGGGTGATTG AAATTCAAGA TACCTATGAG
AAGAACGGGA TCAATGAAGA TGTGCCGCTG ATGGTAACTA AGCATTGTTT ACGCTTTAAC
TTTAATCTTT GTCCTAAAGA GGTGCCGGGT ATTAAAGCCG ATCCTATGGT GCTGGAAATT
GGTAAAGATG TATTAAAGCT AGTGTTCGAC TGTCCGAAAT GTGAAATGAT GGTTGTCGGT
GAAAACAGAC AGGTTCGCAC TACTGATTAG
 
Protein sequence
MSNVGIYTPS DKPEETLKDE SHSPVELQNN RLELLAPAKN ADFGIEAIRH GADAVYIGGP 
AFGARATAGN SVEDIARLCS FAHQYHAQVF VAINTILMDD ELQAAQKLIW EVYEAGADAL
IVQDMGILQL DLPPIALHAS TQMDNRSPEK VAFLEQVGFS QVVLARELGL SQIRDVAANT
NMQIEFFIHG ALCVAFSGLC NLSHSFSNRS ANRGECSQLC RLPADLKTRQ GEVLAQNEHL
LSLKDNNQTD NLEALIDAGV RSFKIEGRLK DLSYVKNVTA HYRQELDKII ARRSEFVASS
HGRCEHTFTP DPEKTFNRGK TDYFVHERSQ GMNDFRSPKY IGEEVATVKR IGNDYIEVTS
NETFNNGDGL CFFPSDYAEA KQSDDKLKGL RVNRAEGLKL FVLRMPKELK VGMTIYRNHN
QAFETVLAKE SAKRIIGVDL VLADTDDGVS LTMTDVYGHT ATQSLIVEKT AATDIEKAQQ
GLRKQLAKLG STDFTAHNIS IETAETWFIP TSMLNGLRRD TVAALEQARV EGYQRPKAWK
YNQDAVYPVK HLSYLGNVAN EQAKAFYQRH GVIEIQDTYE KNGINEDVPL MVTKHCLRFN
FNLCPKEVPG IKADPMVLEI GKDVLKLVFD CPKCEMMVVG ENRQVRTTD