| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0721 |
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| Symbol | |
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| ID | 5661120 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 890950 |
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| End bp | 892977 |
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| Gene Length | 2028 bp |
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| Protein Length | 675 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641235266 |
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| Product | histidine kinase |
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| Protein accession | YP_001500583 |
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| Protein GI | 157960549 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATAT TTGTTAACTT AATTTGCAGC CTCTGCACAC TTTGTGCACT TGGCTTAGCG
GGGTTATCGC TCCCCGCGCA CGCTGCAGAC TCCCACCAAA ATCAAAGTAT CGTCTTCGGC
GTTCACTCAA AGACCGCCCC CCTTGAGTGG CGCAATAATG GCGTAGACCA AGGCTTCAAC
CTCGAGTTGA TGGATCGTAT CGGTCAGCTC ATGGGCAAGC GCATCATCAT CCGCCGTAAG
AGCTTCCAGC AGCTACTTAA AGATGTGCAC GACCGTGACT CGCTCATTGA TGTCATCGCC
GTGGTAAGCC CAATTACCAT AGATAGAGAG CTGAGTCAGT CAGACCCCAT TTATGCCACT
CACGCAAAAG CTTACACACT TCAAGGTAAG TCGTTTATCA ATGGCTGGAA TGATCTTGAA
GGCAAACGGG TAGCGATTAA GAAAGGCGCC TTCGTCGATG TCTATATCTC AGGTAAGAAA
CAAGACTTTA CCCGCGTCGA TGTCGACCTC TATGAGACAG GCTTCCAGCT GCTTATAAAA
GGTGAGGTCG ATGTGGTCAT CGCCGAAAAC TTTGTCGCCA GACGCCTAAT GCCGCTGTAC
CCATCAATTA GAAGCTCGAG CGATCCGCTT ATCTATGGTG CATTTAACTT CGTCAGTAAC
TATAAAAACG CTGAAATGAT GGCGCAAATC AACGACGCGC TTAGACAGTT AAAGCTATCT
GGCGAGTACG ACCGATTAGT CAATAAGTGG TTTGGTACCG GCCGCGAAAA AGTCGACCTG
AATTCGGCAC AGAAGAAGAT GCTCTCCTTA GCCATTTTTG TCAGCCTGCT TTCCGCCGTC
GGCATGCTGC TGACTGGCTA TATCAGTCTG AGTCTACGTA GACGCTCTAA AGCGCTAAAA
GTGGAGTTAC TCCAGCGTAA GAAAGCCGAA GAGGCGATAT CGAACTTATC GAAGCAGTTC
CAGTCGGTAC TCGACGGGAT CCCCCACGGC GTCACCCTGT TCAATCGAGA CGGTGAATGC
CTATGGAGCA ACGATAACAA TAACGACCTG CTGACCAGTC CAGAGTTTCA CTATATTGAT
GGCGCAGCCT TTAACTTAGC GAATGCTCTT TCCGATGCGC TTGTCGAGCA GAAGTCACAA
ACCGCCGATA TGCAGGTTAA TAATCAGTAT TGGCAGCTGC AGCTTCACCC TATTAGCCAA
CAGCAGGTGG TGATTTTGCT TGAGGAAGCC ACCGAACAAC ATAGATTGCG CCAAGCCAAT
GACGAAGCCA GCCGCCTCGC CTCTCTAGGT GAGCTATCGG CGGGGATTGC CCATGAGATC
AATAACCCGA CGGGCATTAT CATTCATTCG ATTGCCTTTA TTAGCGATGC CCTTAAAGAT
CTATCTGAAG CCAGTGATAA CTATCAAAGA CAAAACCCGT TTTGGACTGT AGCGGGCATG
GCGCCCGACA GTGCCATGAA CGAGCTAGAC GTGAGTAGTC AGTCTATTAA TGAGGGGGCC
GAGCGCATAA GCCGTATCGT AAACGACTTA AAACGCTACG CTTTGCCGAC TATAGCTAAC
GAGTATCAGC CAATCAGTGT TAATGAAGTG GTGGAGGTAT CGCTGCGCCT CACAGCCAAT
CAGACCAAGA TATTTAACGT CACTACCGAT TTACTGCTCC CAAGCCCAGT TGTTATGGGG
GATGCCCAGC AACTGCATCA AGTACTGATC AATCTTATCC AAAACGCCTG CCATGCCATC
AGGCAAGATG CTGAGTGCTA TGAGTGCAAG GAACACATTA ATATCCAGAC CTGTGTCGAA
GATAAACATA TCTGCCTAGT GATCAGTGAT AAAGGCGCCG GAATGGATAG CGCCACCCTA
CAACGCATTA CCGAACCTTT CTTTACTACG CGCCGTTCAA GTGGCGGCAC AGGACTTGGC
CTCTCAGTGT GTAGCCGCAT CATTAAAGAG CACAAGGCCG ACATGCAGAT CACCTCGCGC
CTAGGCAAAG GCACTGTGAT AAAAATACGC TTTCCTTTGG AGTACTAA
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| Protein sequence | MKIFVNLICS LCTLCALGLA GLSLPAHAAD SHQNQSIVFG VHSKTAPLEW RNNGVDQGFN
LELMDRIGQL MGKRIIIRRK SFQQLLKDVH DRDSLIDVIA VVSPITIDRE LSQSDPIYAT
HAKAYTLQGK SFINGWNDLE GKRVAIKKGA FVDVYISGKK QDFTRVDVDL YETGFQLLIK
GEVDVVIAEN FVARRLMPLY PSIRSSSDPL IYGAFNFVSN YKNAEMMAQI NDALRQLKLS
GEYDRLVNKW FGTGREKVDL NSAQKKMLSL AIFVSLLSAV GMLLTGYISL SLRRRSKALK
VELLQRKKAE EAISNLSKQF QSVLDGIPHG VTLFNRDGEC LWSNDNNNDL LTSPEFHYID
GAAFNLANAL SDALVEQKSQ TADMQVNNQY WQLQLHPISQ QQVVILLEEA TEQHRLRQAN
DEASRLASLG ELSAGIAHEI NNPTGIIIHS IAFISDALKD LSEASDNYQR QNPFWTVAGM
APDSAMNELD VSSQSINEGA ERISRIVNDL KRYALPTIAN EYQPISVNEV VEVSLRLTAN
QTKIFNVTTD LLLPSPVVMG DAQQLHQVLI NLIQNACHAI RQDAECYECK EHINIQTCVE
DKHICLVISD KGAGMDSATL QRITEPFFTT RRSSGGTGLG LSVCSRIIKE HKADMQITSR
LGKGTVIKIR FPLEY
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