Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_0712 |
Symbol | |
ID | 5661111 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 874636 |
End bp | 875814 |
Gene Length | 1179 bp |
Protein Length | 392 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641235257 |
Product | phosphate-selective porin O and P |
Protein accession | YP_001500574 |
Protein GI | 157960540 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR03304] outer membrane insertion C-terminal signal |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000000988796 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATGATGA AAAAAACCTT ACTTGCCACA GCGCTAGTTG GCATGTTCGC GTCTCAAGGT GCTGTCGCGG CAGATGATTC TGCTGAGCTA CGAAAAATTA TTGAGCAACA ACAGAAAGTT CTTCAAGACC TAGAGAAGCG TCTAGATGAA ACAGAGAAGC GCGTTGAAAA AACCGCTGAC GTCGTTGAAG AATCGGCAAG TGAGTCAAAG AGCGCGACGA CTATCGGTGG TTATGGTGAA CTACACTACA ACAACATCAC TGATAACAAG TCTGGCAAAG ATAAGAAAGC TATCGATTTT CACCGTTTTG TATTGTTCTT CGGTCATGAG TTTACCGAAA GCACACGTTT CTTCTCTGAG GTTGAAATTG AGCACGCACT TTCTGGTGAC GATAAGCCAG GCGAAGTTGA GCTAGAGCAA GCGTATATCG AGCATGATTT CAATGAGATG TTTACCGGTA AAGCGGGTCT GTTCCTAGTA CCAGTCGGTA TTATTAACGA AACTCATGAG CCACCAACCT TCTACGGTGT TGAGCGTAAC CCTGTTGAGA AAAACATCTT GCCTGCAACT TGGTGGGAAG CGGGTGCGGC ACTTAATGTT AAAGCCTCTC CAGGTTTAGC ATTCGACGGT GCTATCACAT CAGGCCTTAA GGTTGATGAA ACTTATAACA TCCGTGGCGG CCGTCAAAAA GTGGCTAAAG CTGATGCGTC AGACCTTGCC TATACTGCTC GTGTTAAGTA CACAGGCGTA ACAGGTCTAG AGCTAGCCGC TACTGCCCAG TACCAGTCAG ATCTAACTCA AAGCAAAGCG GGTGTCGATA CGGCTTCGGC AACTTTGCTA ACTGCTCACG CAATTTACTC AATCCAAGGT TTCACGGTTA AAGCGCTTTA CGCTCAGTGG GACATCGACG GTAAAGAAGC TGAAGCATTA GGTCGTGATG AGCAAAACGG TTGGTACATT GAACCATCTT ACCGCATCAA TGAAAGCTTT GGTGTGTTTG CTCGCTACAA CGAGTACGAC AACAATGCAG GCAATAGTGA AGACACTAAA GTCGAGCAAA CCAACCTAGG TATCAACTAC TGGTTGCATG AGAATGTGGT ATTTAAAGCT GACTATGAAA AAGTGGGCGG CGCTAAAGAC GCTGACGGCT TTAACTTAGG CGTGGGTTAC CAGTTCTAA
|
Protein sequence | MMMKKTLLAT ALVGMFASQG AVAADDSAEL RKIIEQQQKV LQDLEKRLDE TEKRVEKTAD VVEESASESK SATTIGGYGE LHYNNITDNK SGKDKKAIDF HRFVLFFGHE FTESTRFFSE VEIEHALSGD DKPGEVELEQ AYIEHDFNEM FTGKAGLFLV PVGIINETHE PPTFYGVERN PVEKNILPAT WWEAGAALNV KASPGLAFDG AITSGLKVDE TYNIRGGRQK VAKADASDLA YTARVKYTGV TGLELAATAQ YQSDLTQSKA GVDTASATLL TAHAIYSIQG FTVKALYAQW DIDGKEAEAL GRDEQNGWYI EPSYRINESF GVFARYNEYD NNAGNSEDTK VEQTNLGINY WLHENVVFKA DYEKVGGAKD ADGFNLGVGY QF
|
| |