Gene Spea_0712 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_0712 
Symbol 
ID5661111 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp874636 
End bp875814 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content46% 
IMG OID641235257 
Productphosphate-selective porin O and P 
Protein accessionYP_001500574 
Protein GI157960540 
COG category 
COG ID 
TIGRFAM ID[TIGR03304] outer membrane insertion C-terminal signal 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000988796 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGATGA AAAAAACCTT ACTTGCCACA GCGCTAGTTG GCATGTTCGC GTCTCAAGGT 
GCTGTCGCGG CAGATGATTC TGCTGAGCTA CGAAAAATTA TTGAGCAACA ACAGAAAGTT
CTTCAAGACC TAGAGAAGCG TCTAGATGAA ACAGAGAAGC GCGTTGAAAA AACCGCTGAC
GTCGTTGAAG AATCGGCAAG TGAGTCAAAG AGCGCGACGA CTATCGGTGG TTATGGTGAA
CTACACTACA ACAACATCAC TGATAACAAG TCTGGCAAAG ATAAGAAAGC TATCGATTTT
CACCGTTTTG TATTGTTCTT CGGTCATGAG TTTACCGAAA GCACACGTTT CTTCTCTGAG
GTTGAAATTG AGCACGCACT TTCTGGTGAC GATAAGCCAG GCGAAGTTGA GCTAGAGCAA
GCGTATATCG AGCATGATTT CAATGAGATG TTTACCGGTA AAGCGGGTCT GTTCCTAGTA
CCAGTCGGTA TTATTAACGA AACTCATGAG CCACCAACCT TCTACGGTGT TGAGCGTAAC
CCTGTTGAGA AAAACATCTT GCCTGCAACT TGGTGGGAAG CGGGTGCGGC ACTTAATGTT
AAAGCCTCTC CAGGTTTAGC ATTCGACGGT GCTATCACAT CAGGCCTTAA GGTTGATGAA
ACTTATAACA TCCGTGGCGG CCGTCAAAAA GTGGCTAAAG CTGATGCGTC AGACCTTGCC
TATACTGCTC GTGTTAAGTA CACAGGCGTA ACAGGTCTAG AGCTAGCCGC TACTGCCCAG
TACCAGTCAG ATCTAACTCA AAGCAAAGCG GGTGTCGATA CGGCTTCGGC AACTTTGCTA
ACTGCTCACG CAATTTACTC AATCCAAGGT TTCACGGTTA AAGCGCTTTA CGCTCAGTGG
GACATCGACG GTAAAGAAGC TGAAGCATTA GGTCGTGATG AGCAAAACGG TTGGTACATT
GAACCATCTT ACCGCATCAA TGAAAGCTTT GGTGTGTTTG CTCGCTACAA CGAGTACGAC
AACAATGCAG GCAATAGTGA AGACACTAAA GTCGAGCAAA CCAACCTAGG TATCAACTAC
TGGTTGCATG AGAATGTGGT ATTTAAAGCT GACTATGAAA AAGTGGGCGG CGCTAAAGAC
GCTGACGGCT TTAACTTAGG CGTGGGTTAC CAGTTCTAA
 
Protein sequence
MMMKKTLLAT ALVGMFASQG AVAADDSAEL RKIIEQQQKV LQDLEKRLDE TEKRVEKTAD 
VVEESASESK SATTIGGYGE LHYNNITDNK SGKDKKAIDF HRFVLFFGHE FTESTRFFSE
VEIEHALSGD DKPGEVELEQ AYIEHDFNEM FTGKAGLFLV PVGIINETHE PPTFYGVERN
PVEKNILPAT WWEAGAALNV KASPGLAFDG AITSGLKVDE TYNIRGGRQK VAKADASDLA
YTARVKYTGV TGLELAATAQ YQSDLTQSKA GVDTASATLL TAHAIYSIQG FTVKALYAQW
DIDGKEAEAL GRDEQNGWYI EPSYRINESF GVFARYNEYD NNAGNSEDTK VEQTNLGINY
WLHENVVFKA DYEKVGGAKD ADGFNLGVGY QF