| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0705 |
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| Symbol | |
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| ID | 5661104 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 866859 |
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| End bp | 869231 |
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| Gene Length | 2373 bp |
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| Protein Length | 790 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641235250 |
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| Product | penicillin-binding protein 1B |
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| Protein accession | YP_001500567 |
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| Protein GI | 157960533 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
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| TIGRFAM ID | [TIGR02071] penicillin-binding protein 1B |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.559633 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAGATA AAGCTACACC TAAAGCGGCC ACTAAAAGAG CGCCTGCGAA GAAAAGAGCC
ACCACCAGAA ATCCGAGAGC GAAAAAGCCA GCGCCAAAGA AAGCCCCGAA GAAAGCGCCT
TCGGGGTGGG GTAAGAAGAT CTGGTCTATT AGCTGGAAGC TTGGCTTAGT TTTAGCTGTG
GCAGTCGCCT CTTATGGTAT CTATCTCGAC CAAATCATTG CCCGTAAGTT TGAAGGGCAG
AAGTGGCATC TTCCGGCGCA GGTGTTTAGC CGCTCTATGG CGCTATATCC AGGAGCTGCG
GTTAGTCATG CTCAGTTAAT GTCTGAACTT AAGCTACTTG GCTATCGTAA GGTGGCCAAT
CCGCGTCAGG TGGGGGAGTT TTCCGCCTCT AAGACCAAGA TTGATCTTTG GCGTCGACCA
TTTTTGCATC CTCAAGGAGA TCAGGTTGAA CAGAGAGTGA TGATCACCTT CGACAGTAAT
GGTGTGGTCT CAGTTGCCCG TAACAGCGAT AAGCGTCAAC TAGCCGTGTT CCACCTCGAA
CCTGTGCTTC TGGACAGGAT CATCACAGGT GACGGCGAAG ACAGGCTATT TGTGCCGACC
GATAAGATCC CTAAGCCTAT CGTTAATGCG CTTATCTTAG TTGAAGACCG CAGTTTCTAT
GAGCATCATG GTGTTAATCC GTTTGCGATT CTGCGTGCGG CCATGGTGAA TATCAGTGCC
GGGCGAACGG TGCAAGGCGG CTCGACCTTG ACCCAACAGT TAGCGAAGAA CTTCTTCCTG
TCTAGTGAGC GCTCGCTTAG CCGTAAATTG CGTGAAGCGC TGATGGCGAT CATTATCGAT
TTTCGTTATG AAAAAGATGA GATCTTAGAA GCCTACCTCA ATGAAGTGTA CATGGGGCAA
GACAAAGCCC GTGGCGTGCA CGGTATGGGC TTAGCTTCAC AGTTTTATTT TGGTCGACCA
ATCGCAGAGC TTACCGTACC GCAGCAGGCA TTTTTGGTGG CGGTGATCAA AGGGCCTTCC
TACTACAATC CATGGCGTTA CCCTGAGCGC GCTCAAGAGC GACGCGATTT AGTATTGCGC
TTGCTGATGG AGGCGGGCGA TCTGAATGTG GCGCAGTATC AAGCTGCAGT CGAGTCGCCA
CTGGGACTAA GAAAAGCCAA CAAGTCAGTG CACCAAAAGT TACCGGCCTT CTTCTCAGTA
GTGAAGAATG AACTTGCCAG TCGCTATGGC GATGCCTTGT TGAAGCAATC AGGGGTTAAG
GTCTACACCA CGTTGGACCC TATGGCTCAA GAAGCCGCCG AGAAAGCTGT TGAAAAGACC
TTGAAGCAGC TGGGTAAAAA TGATGAGAGC TTGCAGGTCG GCATGGTACT AACCGATAAA
TACTCAGCTG GTATTGCCGC GATGGTAGGC GATAAAGTGC CTAGCTATCA GGGCTTTAAC
CGTGCCGTAG AAATTCGCAG ACCCATAGGT TCGTTAATCA AACCTTTTGT CTATGCTACC
GCGCTTAACC AAGGCGATAA GTACAATTTG GTGTCGCCGT TAAAAGATCA GCCAATTACC
CTTAAAAATG GTCAAGGTAA GACCTGGTCG CCGCAGAACG TGGATAAGAA GTTCCGTGGT
GAGGTGCCGC TGTTAACCGC ATTTAAAAAG TCGATGAACG TGCCAACGGT AAACCTAGGC
ATGGCGATTG GAGTGAGTAG CGTGGCGACC ACGCTGGACA AGGCGGGTTG GCGCGAGAAG
ATCCCTGAGT ACCCATCTAT GTTGCTCGGT GCGGTCAATG GCTCTCCCTT GATGGTGGCG
CAGGTGTTCC AAACGATTGC CGATGATGGT CGTTATCGCC ACTTGAACTC GGTGACTACG
GTACTGGATG CGAATAATCA GCCACTAACG GCATCACGGC CTCAAGCGAG TCAAGCCATC
CCTACCGCCA GTAATTACCT GGTTAAATAT GCTATGACTC AAGTGGTTGA ATCTGGTACG
GCTAAACGCT TAGGTAGCTC ATACCCATAT GTCACCTTGG CGGGTAAAAC GGGTACCAGT
AATGACTCAC GAGACTCTTG GTTTGCCGGC TTTGACGAAC GAAATGTGGC GGCCATCTGG
ATTGGCCGTG ATGATAACGG CAAGACCGGG CTCTACGGCA GTAATGGCGC CATGGCCGTC
TATCAAGCCT TCTTAAGTAA CCGTGCACCT CTTAGTCTTC GCATGGCGCC AGTCGATGGT
GTAGTACAAG GTTACTTTGA GCGCGATACT GGCAAAGCGC AGGAGCCACA ATGTGCCAAT
GTGGTAAAGG TGCCAGCCCT GAGAGAAAGT TATCAGCCAG TGGCTAATTG CGGCGAGCCA
CTGCCTTGGT GGAAGAAGCT GATTGGTGGT TAA
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| Protein sequence | MTDKATPKAA TKRAPAKKRA TTRNPRAKKP APKKAPKKAP SGWGKKIWSI SWKLGLVLAV
AVASYGIYLD QIIARKFEGQ KWHLPAQVFS RSMALYPGAA VSHAQLMSEL KLLGYRKVAN
PRQVGEFSAS KTKIDLWRRP FLHPQGDQVE QRVMITFDSN GVVSVARNSD KRQLAVFHLE
PVLLDRIITG DGEDRLFVPT DKIPKPIVNA LILVEDRSFY EHHGVNPFAI LRAAMVNISA
GRTVQGGSTL TQQLAKNFFL SSERSLSRKL REALMAIIID FRYEKDEILE AYLNEVYMGQ
DKARGVHGMG LASQFYFGRP IAELTVPQQA FLVAVIKGPS YYNPWRYPER AQERRDLVLR
LLMEAGDLNV AQYQAAVESP LGLRKANKSV HQKLPAFFSV VKNELASRYG DALLKQSGVK
VYTTLDPMAQ EAAEKAVEKT LKQLGKNDES LQVGMVLTDK YSAGIAAMVG DKVPSYQGFN
RAVEIRRPIG SLIKPFVYAT ALNQGDKYNL VSPLKDQPIT LKNGQGKTWS PQNVDKKFRG
EVPLLTAFKK SMNVPTVNLG MAIGVSSVAT TLDKAGWREK IPEYPSMLLG AVNGSPLMVA
QVFQTIADDG RYRHLNSVTT VLDANNQPLT ASRPQASQAI PTASNYLVKY AMTQVVESGT
AKRLGSSYPY VTLAGKTGTS NDSRDSWFAG FDERNVAAIW IGRDDNGKTG LYGSNGAMAV
YQAFLSNRAP LSLRMAPVDG VVQGYFERDT GKAQEPQCAN VVKVPALRES YQPVANCGEP
LPWWKKLIGG
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