| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0680 |
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| Symbol | |
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| ID | 5661079 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 842022 |
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| End bp | 843188 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641235225 |
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| Product | porin |
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| Protein accession | YP_001500542 |
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| Protein GI | 157960508 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.424836 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAG CGCTAGCAAT ATTACCCTTT ACCGCATTGG CCTTTGTGCC AACTTGTTCA
GCTGTAGATG TTTTTAAAGA TGATAAGAAT GTATTCCAGA TAGGGGGGTA TATTGATGCT
CGTGTCATCG ATACCCAAGG CGTGACCGAA GTGGTTAACG GTAGTTCACG GATTAATTTC
GCCTTTACTC GTGATATGTC GAATGATTGG ACAACCTATG CAAAGTTGGA GTGGGGCGTC
AATCCATTCG GTAATAGCAC TATTGCGTAT AGCAGTGAGA GTAACTTCGA AACTAAAAGT
GGCGACTTTC TAAATAATCG TCTTGGTTAT GTGGGTCTGA GCCATGATGC ATACGGCTCT
ATTACTATAG GTAAGCAGTG GGGGGCCTGG TACGATGTGG TGTATAACAC CAACTATGGC
TTCGTTTGGG ATGGTAATGC ATCGGGAACT TACACCTATA ACAAATCGGA TGGTGCCATC
AATGGTGTTG GTCGTGGTGA CAAGGTCATC CAATACCGTA ATGGCTTCGG TGACTTTAGC
ATGGCGATTC AGATGCAGCT TAAAAATAGT GTCTCTGATA TCGAAGATGA TGGCTCGAAT
AGTCCTAACC GATTGGTGAT GACTGAGTAT GACAATACCT ACGGCATAGG CTTGACCTAT
GAGGCAACCG AGATGCTAAC CCTGACCGCT GGCGGTAACT TTGGTGAGCC TGAGGGGACA
ACGGCTTCTG GAGTGGTGAT TTCTGAAACC GATTATATCT ATGGCGTGGG AGCCAGTTGG
GGCAACTGGG ATAGCTACGG GTTTTATGTC GCGGCAAACG TAAACGCCAA TGAGTTTCAC
GATACCGATA ACATAGGCCG CTTCTTGCAA GAGGCGATCG GCTTAGAGTC TATCGCATCG
TATCTGTTCG ATAATAACGT GAAAATTTTG GCGTCTTACA ATATCTTAGA GGCGGGAGAT
AAGTACGAAG CTGCTCATCC CGGAGATGTG TTTAAGCGAC AATTTGCCTT TGCTGGTGTG
CATTATATTT GGGATAACAG CGTTATCTTC TATCTAGAAG GGCGGGTAGA CTTTAGTGAC
TTCTCTAGCT CAACTCCAGG TCTTGAGGCA AGGCAAGCAC TGACTGAAGA CGACGGTATT
GCAGTCGGAG TGCGTTATAC CCTGTAA
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| Protein sequence | MKKALAILPF TALAFVPTCS AVDVFKDDKN VFQIGGYIDA RVIDTQGVTE VVNGSSRINF
AFTRDMSNDW TTYAKLEWGV NPFGNSTIAY SSESNFETKS GDFLNNRLGY VGLSHDAYGS
ITIGKQWGAW YDVVYNTNYG FVWDGNASGT YTYNKSDGAI NGVGRGDKVI QYRNGFGDFS
MAIQMQLKNS VSDIEDDGSN SPNRLVMTEY DNTYGIGLTY EATEMLTLTA GGNFGEPEGT
TASGVVISET DYIYGVGASW GNWDSYGFYV AANVNANEFH DTDNIGRFLQ EAIGLESIAS
YLFDNNVKIL ASYNILEAGD KYEAAHPGDV FKRQFAFAGV HYIWDNSVIF YLEGRVDFSD
FSSSTPGLEA RQALTEDDGI AVGVRYTL
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