| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0628 |
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| Symbol | |
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| ID | 5661028 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 773739 |
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| End bp | 779036 |
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| Gene Length | 5298 bp |
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| Protein Length | 1765 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641235174 |
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| Product | multi-sensor hybrid histidine kinase |
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| Protein accession | YP_001500491 |
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| Protein GI | 157960457 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAGAC TTCGTACCTT TCGTAGCCGA ATTTTATCGC AAATGGCGCT GCCTCTTATC
GCCATTATGG CAGCGGTATT TAGTGTCAAT GCTTGGTTTA ATTATCAAGA TGAAGAGCAA
GACATTTACC AATACATTGG TCAGAAAGCA GAGGGGGCAG CTCTACGTTT ACAGCATTTG
TTAGTCACTG CAGAAACCGA TACCCGTTCA TTTTCCGAGT TCTTGACTGA GATGAGCAGT
CGTGAAGAGC TTGCCGATAA AGATAAGTTG CAACTTCTAT TAACTCAACG CCTCGAACGC
CATGCTGATT TCTATGGCAG TGCTATCGCG TTTCAAAAGC ACTTTATTCC AGGTCGTGAG
CTGTATGCAC CCTATGTTTA TCGAGATAAA ACTAACATTG GTATGATGGA TATCGGCGCC
GAAGGTTACG ATTACACAAC CGGTGAGTGG GACTGGTGGA GCCGCGCCAT CGACGATATC
AGGGGCTATT GGACTCCCCC CTATCTCGAT GAGGGCGCGG GTAATGTATT AATGGTCAGT
TTCTCGCAGC CGTTTGGTGA TACACGACCT TTTACGGGCG TGGTTACCGT CGATCTGGCG
TTAAACTCCA TTCCGCAGAT GGTGGGAGTA TCGGCTAAGC GGATCGTGGT AATTGATGAT
AATGGCCAGC TCATCTACCA TGCCAATAAT CGCTTGCTGC TTGAGAGTAG CGCCGATAAA
TGGCTGTCTC AATCTAAGCA AAACCAGGAT TTCATTGACT TAGTTAACCG AGGTAAGCCG
GGCTACTCCT ATATAGAAGA TAGCGCAGGT GGCAAATACC TTGCCAGTGT TGGCGTAGTC
CCTGCGCTGA ATTGGCGGGT GGTGATCATG ACATCTGAGG GGCTGCTTCA TGGTGAATTT
TTCCGTGATT TCACTGCCTT GAGCCTCAAC CTGATATTAC TTTCTATTCT GCTTCTACTG
ACTGGATATA TCACCTCTAG GCGCTTGACC CGACCGATAG AAGAGCTAGA GGCGGGCATA
GTTGCTTTTG GTGCTGGGGA GACGAAGCGG ATTGCAAAGC CCCGCGGAGC GGCGAGTGAG
ATAGCCACCT TAACCGATAA GTTTAACGAA ATGGCTGAGG TGCTAGAGGA GCGAGAGGCG
GCGTTGCTGG ATTCTCGCGG TAATCGCTTC GCAAAGTTAA TTGATGGCAT GAGTGATAAG
TCTTTCTATT GCTCTGTTGC CCCCGATGGC TTGCTGGATC AGGTGAGTGA TGGCGTCGAG
AAGGTGTTGG GAGTCGCACC GGAGCTTCTT AAGCGCAAAT ATCAGAGGAT GTTTTCTGAC
AATCCCATCA ACGAGCTTAA TTGGCAGTAT ATGGACAGGG CGTTGCTAGG GGAAAATGTG
CCACCGCACC AGATTGAGAT GCTCGATGGC TTCGGTAAGC TCCGGCGCTT AGATGTGTTT
ATGCAGCCTT TGCTATCTGA TAATCAACAA CTGCTCTCCA TCGAGATGTT ATTTAATGAT
GTGACCGAAC AGTTTTCTGC CGTTGCTTGG TCAAACGCCG TGCTTGAGTC TGCGCCTGAG
GCGATGCTGA TTGTCGAAGA GTCGGGACAG TTAGTGTTTA CCAACAGTCG TTGTCAGCGG
CTGTTTGGCT ACGATGAGCA GCAGATGTTG GCGATGTCGG TGGACGAGTT AGTGCCGGAA
GCCGTTAGAG AGCAACATGC GGATCTACGA GCTCAGTTTG TGGCAGAGGG ACAAGATCGC
AAGATGGGGC TAGGGAAATC GTTAAAGGCT CGTAAGAGCG ATGGTGGCGA GTTTCCGGTG
GAGATCTGTC TAGGTCTACT GCCAATTGCT GATGATGGTC AGCGTCAGGT GGCCGCAACG
GTTAGAGATA TGACCCTTGA GCTTGAGATT GCCCAGCAGA TCAAAGATAG CGAGAGTCGC
TTTCGAGGCT TAGTGGCTAA TATTCCTGGC GCTGTCTACC GCACTCGCGT TGGCGATAGC
TGGGTGATGG AGTATATCAG CAGCAATATC AGCGATATTA CAGGGTTCCC TGCATCAGAC
TTTATTGAAA ATAGTCATCG TAGCTTTGCC AGTTTAATCA TCGAGCAAGA TCTGGCGGCA
ACCACACAAG CCATAGAGCA GGCACTTTTA AAACAAAAGA GCTTCGAAGT GCAGTATCGC
ATCAAGCACA GAGATGGCAG CATCCATTGG GTGCATGAAA AAGGCAAGGC TATCTACAAT
GATGATGGGG TGGCGCTCTG GTTTGATGGC AGCATAAATG ACATCACCAG CAGCAAGTTG
GCCCAAGAGA AGATCGCCCA ATCTCAACAG CAGTTAGAGA CGATCACCGA GTCGATCCCC
AGCACGGTTT ATCAGCTGCA TTGGTGCAAT AACAAGGATC GCACCTTTAC CTTCCTATCC
AGCGCCTGTA TTACGACCTT AGGTTTTCAC CGTGACGAAG TGATGAGTAA TTTTGACTTG
GTTGCTGAGT GTATTATTAG TGAGGAGCGC TCACATATTA TCGAGGCGCT GTCGGGTAAG
AGCAGTAAAG GTCTACAGTG GACCGAAGAG TTTAGATATC GCCATCCTAT CGGTGATATC
CGCTGGCTAC AGGCGGGGGC TCAGGGAGAT CTTCAGGCCG ATGGCTGCAT TATCTGGAAC
GGTTACTTGA TGGATATCAC CGACCGTAAA CAGATAGATA TGGATCTTGA AGATCGCGAG
GCGCACTTCA GGGCGCTGTT CGATAATGCC GGCATCGGTA TCGTCAATGT CGATGAGCGT
GGCAACATTC TCGATTGTAA TGAGCAGTTT AGTCTGTATA TGCAAACCGA TGTTGCTCAT
TTAAAGAGCC GTTCTTTCTT CGATTTTCAA CACAATGATG ATCGTGATAA AGCCAGGAGC
GTATTTGCCA AACTCATCGA AGGTGGCAGT GACAATATAC TCACCGAGCT GAGACTGCTT
AATCAGTCTG GTGAGTGTAT GTGGATGGAT ATCACCCTGA CTAAACTACA AGATAAACAC
GGTAAGTTAA CCTCTGTGGT GCTGTCGATG GCTAATATCA CCTCGCTAAA GCAACTTTCG
GTGGCACTTA AACAGGCTAA GGATAGCGCG GATGCGGCCA ATCAAGCCAA GAGTGACTTC
TTGGCCAATA TGTCCCATGA AATCCGTACT CCGATGAATG CCATCATAGG CATGTCGCAA
CTCTGCTTAC AGACCGAGTT GGATGCAAAA CAGCAAAACT ATATACAGAA AATAGATAGA
GCCTCTAAGT CTCTACTTGG CATTATTAAT GATATTTTAG ATTTTTCTAA GATAGAGGCG
GGCAAGTTAG ATATCGAGTC TGTCGATTTC CAGCTCGATA CTCTCCTTGA AGATCTCAGC
GATATGTTTT CGGTCAAGGC GAGTGATAAG CGTCTCGAGC TACTCTTTGC CGTTGCCCCC
AATATTCCAA GACATTTGCT AGGCGATCCA CTGCGTCTAA GTCAGGTGCT GATCAATCTA
ATGAATAATG CCATCAAGTT TACCGAGCAG GGCGAGGTGC TGCTGTCGAT TAGTCAGTTA
GAGCGCGTCG AAGATGACAT AGTGCTTAGA TTTAGCGTCC GCGATAACGG TATTGGTCTC
ACTGAGGAGC AGCGTAACCG ACTGTTTAAG TCCTTTAGCC AAGCTGATAC CTCAACCACC
CGAAAATATG GTGGAACGGG ATTAGGCCTT GCCATCAGTA AGCAGCTAGT AGAGCTAATG
GGAGGGGAGA TAGGGGTTGA AAGTCAGTTT GGTAATGGCA GTACCTTTTT CTTTAGTGTG
AGGCTGAAGG TTGCCGATAA TAAGCTGTTA AAGGTTAAAC ATGAGATCGA AGGGATGCGA
ATCTTAGTGG CCGATGATAA CGCAACCGCC CGCGATATTC TGCGCACGAC TCTTGAGAGT
ATGGGTTTTG TAGTGGATGC AGTTAAGAGT GGTAGCGATG CCATCGAGCG TTGCCAACAT
ACTCACTATC CGGTTGCCCT TATCGACTGG CAGATGCCGG AGATGAACGG ACTTGAGGCG
GCCGAGGTCA TTTTTGCTGA GCAAGAGACT CCCCCTAAGG TGTTGATCGT ATCGGCCCAT
GCCAATGCTG AATTTCTCGA ACAGATTGAG CGCAGTGGCA TCGCGGGTTA CATCACTAAG
CCTATCAGCG CCTCGCGACT GCTGGACGGA ATTATGTCCT CGCTTGGGAA AAACGGCACC
ATGGCGGTTA GGCGTCAGGG AGCCGATATC AGCCAAGAGC TATTAGGCCA GTTACAGGGC
AAGCGAATTT TGCTGGTGGA AGACAATGAC ATGAATCAAG AGGTCGCGAC CGAGTTTCTT
GAGCAGGTCG GTGTGGTGTT GTCCATTGCT GATAATGGCC AGATAGCACT GGAGAAGTTG
GCGATGCAAA GCTTCGATCT GGTATTGATG GATTGTCAGA TGCCTGTGAT GGACGGTTAT
CAGGCGACAC GAGAGCTAAG AAAGCTCCCC GGATTGGCTA ATCTACCTGT AATTGCGATG
ACGGCGAATG CGATGGCGGG AGACAGGGAG ATGTGTCTAG ATGCAGGCAT GAACGACCAT
ATTGCTAAGC CAATCGAAGT GTCCTTACTC TACAGCCGAC TACTGCAATA CCTTGGAGAT
GGCTCAAAGA GTGTATTGCC GTCCGATCTT CAAGCGCAGC AGACCCAAGA GCTGCTGTTT
TGGCCGCAAC ATGAGGCGCT TGATATCGAC AAAGGTCTGC AATTAGTACA GAACTCTGTG
CGGCTTTATC GGCGGATCTT TGAGCGTTTC TACAGTGGTA AGCGCCATAT CGCCGAGGAT
ATTGAGTCAG CGCTTAGCCA AGGTAAAACC GATGACGCCA TACGTTATGC TCACACGCTT
AAAGGGGTGT CAGGTAACTT ATGCTCGCCT GATTTAGTGA GCCTGGCAGC TCAAGTTGAG
GCTAAGCTTA TTGACTCATC GACGGCGGAT GTGAGCGATG AAGTAGCTAA AATCGCCGAG
TTAACAGTAT CGATATGTGC GGCGATTGCA GACTGGATGC ATCATCTAGA TAGCAATGAC
CGAGATGAGA GTGCTGATGA CAAAAAGCCG CAGATGTCAG AGCCTGAGCT GCAACAGGCG
GTGAGTGAGC TGTTACAGAT GCTAGAGGAG GCAGACTCAG ATGCTGTCGA TAAAATGAGT
GAGATAAGGG AGCGGGTCTC TGAATCGTTA TGGAAAAAGA TGAGTCCGGC GGTAGCCATG
GTCAATAGCT ATCAGTTTGA TCAAGCAGTC GACTTGATCC ATGCTCTGTT TAATGCAGGC
TCACCAACCA AAGACTGA
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| Protein sequence | MSRLRTFRSR ILSQMALPLI AIMAAVFSVN AWFNYQDEEQ DIYQYIGQKA EGAALRLQHL
LVTAETDTRS FSEFLTEMSS REELADKDKL QLLLTQRLER HADFYGSAIA FQKHFIPGRE
LYAPYVYRDK TNIGMMDIGA EGYDYTTGEW DWWSRAIDDI RGYWTPPYLD EGAGNVLMVS
FSQPFGDTRP FTGVVTVDLA LNSIPQMVGV SAKRIVVIDD NGQLIYHANN RLLLESSADK
WLSQSKQNQD FIDLVNRGKP GYSYIEDSAG GKYLASVGVV PALNWRVVIM TSEGLLHGEF
FRDFTALSLN LILLSILLLL TGYITSRRLT RPIEELEAGI VAFGAGETKR IAKPRGAASE
IATLTDKFNE MAEVLEEREA ALLDSRGNRF AKLIDGMSDK SFYCSVAPDG LLDQVSDGVE
KVLGVAPELL KRKYQRMFSD NPINELNWQY MDRALLGENV PPHQIEMLDG FGKLRRLDVF
MQPLLSDNQQ LLSIEMLFND VTEQFSAVAW SNAVLESAPE AMLIVEESGQ LVFTNSRCQR
LFGYDEQQML AMSVDELVPE AVREQHADLR AQFVAEGQDR KMGLGKSLKA RKSDGGEFPV
EICLGLLPIA DDGQRQVAAT VRDMTLELEI AQQIKDSESR FRGLVANIPG AVYRTRVGDS
WVMEYISSNI SDITGFPASD FIENSHRSFA SLIIEQDLAA TTQAIEQALL KQKSFEVQYR
IKHRDGSIHW VHEKGKAIYN DDGVALWFDG SINDITSSKL AQEKIAQSQQ QLETITESIP
STVYQLHWCN NKDRTFTFLS SACITTLGFH RDEVMSNFDL VAECIISEER SHIIEALSGK
SSKGLQWTEE FRYRHPIGDI RWLQAGAQGD LQADGCIIWN GYLMDITDRK QIDMDLEDRE
AHFRALFDNA GIGIVNVDER GNILDCNEQF SLYMQTDVAH LKSRSFFDFQ HNDDRDKARS
VFAKLIEGGS DNILTELRLL NQSGECMWMD ITLTKLQDKH GKLTSVVLSM ANITSLKQLS
VALKQAKDSA DAANQAKSDF LANMSHEIRT PMNAIIGMSQ LCLQTELDAK QQNYIQKIDR
ASKSLLGIIN DILDFSKIEA GKLDIESVDF QLDTLLEDLS DMFSVKASDK RLELLFAVAP
NIPRHLLGDP LRLSQVLINL MNNAIKFTEQ GEVLLSISQL ERVEDDIVLR FSVRDNGIGL
TEEQRNRLFK SFSQADTSTT RKYGGTGLGL AISKQLVELM GGEIGVESQF GNGSTFFFSV
RLKVADNKLL KVKHEIEGMR ILVADDNATA RDILRTTLES MGFVVDAVKS GSDAIERCQH
THYPVALIDW QMPEMNGLEA AEVIFAEQET PPKVLIVSAH ANAEFLEQIE RSGIAGYITK
PISASRLLDG IMSSLGKNGT MAVRRQGADI SQELLGQLQG KRILLVEDND MNQEVATEFL
EQVGVVLSIA DNGQIALEKL AMQSFDLVLM DCQMPVMDGY QATRELRKLP GLANLPVIAM
TANAMAGDRE MCLDAGMNDH IAKPIEVSLL YSRLLQYLGD GSKSVLPSDL QAQQTQELLF
WPQHEALDID KGLQLVQNSV RLYRRIFERF YSGKRHIAED IESALSQGKT DDAIRYAHTL
KGVSGNLCSP DLVSLAAQVE AKLIDSSTAD VSDEVAKIAE LTVSICAAIA DWMHHLDSND
RDESADDKKP QMSEPELQQA VSELLQMLEE ADSDAVDKMS EIRERVSESL WKKMSPAVAM
VNSYQFDQAV DLIHALFNAG SPTKD
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