| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0605 |
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| Symbol | |
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| ID | 5661005 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 743547 |
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| End bp | 748100 |
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| Gene Length | 4554 bp |
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| Protein Length | 1517 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641235151 |
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| Product | carbamoyl-phosphate synthase L chain ATP-binding |
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| Protein accession | YP_001500468 |
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| Protein GI | 157960434 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCAGCA AAAATCAGCC CGCTAACATG ACTCAAGTGC AAACTGCCGA TCCGCTTTTT
CTAAAAGCAG AGCAGTTAGC CAAAGACTTT TCATTGTTTC CAGAGCACAG CAAGCAGACG
CTTTCAGAAG AGATTAAAGG TCTTTTAGAC GATGACGCGA TTCAAGCTAA TCTTAAAGAC
TTGGCTCAGT TAGACGTTGA TGGTTATGTC ACTAAGGTGA TCCAACCGAC CCAAGATAAA
AATCGTCCAG GTGCTAAGCG CATCATTGCC GACCTTAAAG GTAAGCTCAT TACCGAAACC
CATATCGGCC CTTTTTATAG TGCTGAGATC GAACTGAATT TTGGATCTCG TACCCGCCGT
ATTGGTTTTG TGGCGCAAGA GCGTACAACA GCAAACGGTG CTTGGATGCC TGAGCATCAC
ATCGCTTGCT GTAAAGCGAT TCGTCACTTT GCTGAACTGT CTATGCCGAT TGTTTACCTT
ATCGACACTC CTGGTGCCGA CGCAGGTGAA ATCGCTAATA GCCAGAACCA AGCACACTCT
ATTTCAAAAG CGATTGCCGA GAGCGCTAAC GTTGACGTAC CAACTGTAGG TATCGTTATC
GGTGCTGGTT ACTCAGGTGG TGCGATTCCG CTAGCGGCTG CAAACATCCT GTTATCGCTA
CGCGATGGTA TTTTCAACAC CATTCAGCCA CAAGGTCTAC AGAGCATTGC GCGTAAGTAC
AACCTGTCTT GGCAGGAATG TGCTAAATCT GTAGGTGTAT CGCCAGAAGA GCTTTATACC
TCAGGCTGCA TCGATGGCAT CATCGATTTC TCGCCATCTG ACAGAGATGA GCGTCAGCAC
AACCTACGTC GTGCGATTAT CAGCAGCATC GAAGCGGTAG AAAAAGCGGC AGTTAACTTT
GTTCGCGAGT CTGAAGATTT ACGCGAACAT TACGATCGTA GTTTGGCGCG TTTCCTTAGC
CCGTCTAAGA ATCTAGAAGC ATTAGAGCTT AATGCTGAGC TTGCGGTTGC TAACAACCCA
ACGATGCATT TGAACCTATT TGGTAGCACC TACCGTTACC TGCGTTACCT AACGTTGCGT
AGCCGTATTC ATTCTATCTC GCAAGAGCAG TATGGTCGTC TATCTAAGGT GAGCGTACCT
GAAGGTGATT TGTTAGCACG TATTCAGCAA GAGCAAGATC GTGTATTCCA ATCTTGGTTA
TCAAGCCCTG ATAAACTGGT CTATGACGAA GATCTAAACA AGCTTTGGGG TAACTTCATC
GCTAAGCGTG ATGATGTATC TACCGAACGT AACATGCTAA CGCGTTTGAT TTTGGGTGAG
CCAAAAGAAA ACTATAAGAA AGCACGTAAA GCTCTTATCT TCAACATCAG CTGGTCACTA
TACCATCGCT GGAAAGGTAA CGCAGAAAAC AACTTTAAAG GCCTTATTAA CTACCTAGAG
ACGCTTCCAT CTGAAGTGAC TCAAGCAGAT TGGCCTGAGC TGAACAAGCT GACTGTACTT
GACGTGATCA TTCACGACGA GCTACGTGAA GACTTTATTT GGCAGTGTCA TAACATTCTT
GTTTTCAACG CACTTTACGA CAACGTTGTT GGCAACCTAG CATCAATCGC TAAAGAAGCT
ATGATGTCTA AGAGCTTGTC GCGTAACTCA GTTGATAACC TATTGCATGA GTCAATTGAC
CGTGCTTTAT CGACGCAAAA CGTCGCTAAC GATAAGAACA AGTTCTACAA GTGGCTGAAG
TACTTTATGA CTCAGTCAAA CCGCGCCGAG CTACTGACTC GTACTGAGCA GTGGAAGAGT
GTTGGTTTCC CACAGCTAAA CGACAGTCTA TTCGTTATCC TGACTTACTT CTTCGAGCGT
CTACTGCCAG AGTATTTCGA CAGCGAAGAA GAAAGTGGTG AATACACAGG TGCTATTAAC
CCTGTGCGTA TCGGTCGTCG TAAAGACTTC TGGAATCGTT TGACCATGGG TTATCAAGAC
TTACTAATCC AGAAAGTGCT ACGTGACGAA AAACGCACTG GCAAAATGGG TTGGGAATCA
ATTGTTGCTA AGTTCTTCAC CGAATTTGAA GAGATCAATG GCGACAAGAT TTCAGCTAAC
CTGCTGAACT TCCCAGGTTT CCGTCTTTCA ATCGAAGATG CGTTAGACAA GGGCATTCGC
CCATGTGGTT TAATCACAGG TCTTGCCGAC TTCGAGCATA ACGGTCATCC AATGCGTGTG
GGTGTTGCGG TATCAAATAC GGCATTCCAA GCGGGTGCAT TCGATATGGC CGCTGCTGAG
AAATTCAGTG CGCTATTGAT TGAGTGTGCT AAGCGTAAGC TACCGGTTAT CTGTTTCATC
AGCTCGGGTG GTATGCAGAC TAAAGAAGGT GCTGCGGCGC TATTCTCAAT GGCAGTGGTT
AACGACCGTA TTACTCGCTT TATTCGTGAT AACGAATTGC CAGTATTGAT GTTCGGTTTC
GGTGATTGTA CCGGTGGTGC ACAGGCGAGC TTCGTGACTC ACCCTCTTGT ACAAACTTAT
TACCTGTCAG GTACTAACAT GCCATTTGCT GGCCAAATGG TTGTGCCTGC ATACTTGCCA
TCAACGTCAA CGCTATCGAA CTACCTGTCG AAAGTACCTG GCGCGATGGA TGCCTTGGTC
ACCAACCCAT TTAGTGACAC GATTGACGAT CAACTACAGA GCATCGATCC ACTGATGCCA
AAGCCAACGG CTAAGATTGT CGATGTGATT GGTAGCGCTG TATCGACATT AGTACCAGAG
CGTTTAATCG CTGAAGAAGT GATTGTTCAG GATGACCCGC GTCAGCTAAT GAAGCCGATT
GAGAAGGTGC TGGTTCATGC GCGTGGTTGT ACTGCGGTTA AGCTTATCCG TAAGGCGCAC
GACAACAATA TCAAGGTAGT ACTGGTTGCA TCAGATCCTG ATATGACTTC TGTGCCAGCA
GACATGCTGA AAGATAACGA CAAGCTGGTT TGTATCGGTG GTAACACCTC TGATGAAAGT
TACCTAAACG CATACTCGGT ACTTAAAGTT GCCGAATATG AAAACGTTGA TGCACTGCAC
CCTGGTATCG GTTTCCTATC GGAAAGCCCA CAGTTTGCTG CGTTATGTGT AAACAACGGC
GTTAACTTCG TTGGCCCAAG CGTGCACAGC ATGACGACTA TGGGTAACAA GTCGAACGCG
ATTAAGACCT CTCAAGCGCA AAACGTGCCT GTTGTACCTG GTAGCCACGG TATCTTGACT
AACGCAGAGC AAGCGGTAAA CGTTGCCAGC GAAATCGGTT ACCCTGTGTT GCTTAAAGCG
GTACAAGGTG GTGGCGGTAA AGGTATTCAG GTTGTTGAAC GTCCAGGCGA CATGATCTCC
TTGTTCCAAA AGACCTCTAC CGAAGCGGCT GCGGCATTTG GTAACGGTGA CTTGTACCTA
GAGAAGTATG TCACTTCACT ACGTCACATC GAAGTCCAGT TACTGCGTGA CCAGTTTGGT
AACACTAAGG TACTGGGTCT ACGTGATTGT TCTGTGCAGC GTAACAACCA GAAAGTGGTT
GAAGAGTCAG GTTCAACTAT GTTGCCAGAT GAGCTTAAGC AGCGCGTGAT GGAATACACC
CGTTTATTGG GTGATGCAAC AGATTACATG GGCGCGGGTA CGGTTGAATT TATCTATAAC
TTAGACGCTA ACGAAGTCTA CTTTATGGAG ATGAACACCC GTCTACAGGT TGAGCATCCA
GTTACTGAAG CAACTTCTGG TATCGATATC GTAAGCGCTG GTTTTGATAT CGCAGCGGGT
CGCTCTATTG CAGAGCTTGA GCCACAAGAT ATTGGCTATG CGATGGAAGT GCGTGTAACG
GCAGAGAAAG CGGCTCTTGA TAGCAATGGT GTTTTACAGC TACTGCCGTA CCCTGGTTTA
ATCACTGAGT ATCAGATGCC AGAGCGTGAT GATATCGAAA TCATCTCAAT TGCTGGCGAA
GGTAAAGAGG TTTCTCCTTA CTACGATAGC TTGATTGCAC AGATCATCTG CCGTGGTGAG
AGCCGTGAAG ATGTGATTGT TAAGCTACAC GACTATCTAG CAAATCAAGT AGTGATTAAA
GGTATCGCGA CTAACATTCC ATTGCTAACG CGCATCCTTA AAGATGGCAC CTTCAACGAA
GGCGTATACG ACACTAACTA TCTACCACGC TTTATGGCAG AGCTAGATGT GCCTGAGATG
ATTGCTGAGA TGGAAGCGGC AGCAGAAACT GTTGGCGTCG ATACAGCATC ACTTCGTGTT
GGTGAGAGTA ACGAGCTTAA AGTGATGGCG CAGGGCGCAG GTATCTTCTA TACCTCTCCA
GCACCAGGTG AAGCGGACTT TGTTAAAGAA GGCGACATAG TTACTGTAGA TCAGACTTTA
GCGCTTACTG AAGCGATGAA GATGTTCTCT CAGGTGACGC TAGCCGGCTT TAACCGTAAG
AATGCGGTAC TTTACCCTGA AGATCAGCAG TATCGTATCG AGCGTATTCT TAACAGTAAC
GGTCAGCAAG TGTCTCAAGG TGAGTTGCTA TTCGTAGTAT CGCCAGTTGC TTAG
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| Protein sequence | MTSKNQPANM TQVQTADPLF LKAEQLAKDF SLFPEHSKQT LSEEIKGLLD DDAIQANLKD
LAQLDVDGYV TKVIQPTQDK NRPGAKRIIA DLKGKLITET HIGPFYSAEI ELNFGSRTRR
IGFVAQERTT ANGAWMPEHH IACCKAIRHF AELSMPIVYL IDTPGADAGE IANSQNQAHS
ISKAIAESAN VDVPTVGIVI GAGYSGGAIP LAAANILLSL RDGIFNTIQP QGLQSIARKY
NLSWQECAKS VGVSPEELYT SGCIDGIIDF SPSDRDERQH NLRRAIISSI EAVEKAAVNF
VRESEDLREH YDRSLARFLS PSKNLEALEL NAELAVANNP TMHLNLFGST YRYLRYLTLR
SRIHSISQEQ YGRLSKVSVP EGDLLARIQQ EQDRVFQSWL SSPDKLVYDE DLNKLWGNFI
AKRDDVSTER NMLTRLILGE PKENYKKARK ALIFNISWSL YHRWKGNAEN NFKGLINYLE
TLPSEVTQAD WPELNKLTVL DVIIHDELRE DFIWQCHNIL VFNALYDNVV GNLASIAKEA
MMSKSLSRNS VDNLLHESID RALSTQNVAN DKNKFYKWLK YFMTQSNRAE LLTRTEQWKS
VGFPQLNDSL FVILTYFFER LLPEYFDSEE ESGEYTGAIN PVRIGRRKDF WNRLTMGYQD
LLIQKVLRDE KRTGKMGWES IVAKFFTEFE EINGDKISAN LLNFPGFRLS IEDALDKGIR
PCGLITGLAD FEHNGHPMRV GVAVSNTAFQ AGAFDMAAAE KFSALLIECA KRKLPVICFI
SSGGMQTKEG AAALFSMAVV NDRITRFIRD NELPVLMFGF GDCTGGAQAS FVTHPLVQTY
YLSGTNMPFA GQMVVPAYLP STSTLSNYLS KVPGAMDALV TNPFSDTIDD QLQSIDPLMP
KPTAKIVDVI GSAVSTLVPE RLIAEEVIVQ DDPRQLMKPI EKVLVHARGC TAVKLIRKAH
DNNIKVVLVA SDPDMTSVPA DMLKDNDKLV CIGGNTSDES YLNAYSVLKV AEYENVDALH
PGIGFLSESP QFAALCVNNG VNFVGPSVHS MTTMGNKSNA IKTSQAQNVP VVPGSHGILT
NAEQAVNVAS EIGYPVLLKA VQGGGGKGIQ VVERPGDMIS LFQKTSTEAA AAFGNGDLYL
EKYVTSLRHI EVQLLRDQFG NTKVLGLRDC SVQRNNQKVV EESGSTMLPD ELKQRVMEYT
RLLGDATDYM GAGTVEFIYN LDANEVYFME MNTRLQVEHP VTEATSGIDI VSAGFDIAAG
RSIAELEPQD IGYAMEVRVT AEKAALDSNG VLQLLPYPGL ITEYQMPERD DIEIISIAGE
GKEVSPYYDS LIAQIICRGE SREDVIVKLH DYLANQVVIK GIATNIPLLT RILKDGTFNE
GVYDTNYLPR FMAELDVPEM IAEMEAAAET VGVDTASLRV GESNELKVMA QGAGIFYTSP
APGEADFVKE GDIVTVDQTL ALTEAMKMFS QVTLAGFNRK NAVLYPEDQQ YRIERILNSN
GQQVSQGELL FVVSPVA
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