| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0602 |
|---|
| Symbol | |
|---|
| ID | 5661002 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella pealeana ATCC 700345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009901 |
|---|
| Strand | - |
|---|
| Start bp | 740018 |
|---|
| End bp | 740584 |
|---|
| Gene Length | 567 bp |
|---|
| Protein Length | 188 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 641235148 |
|---|
| Product | protein of unknown function DUF335 SprT |
|---|
| Protein accession | YP_001500465 |
|---|
| Protein GI | 157960431 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3091] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTCAAAT CGCTTAATCC TTTCAAATCC TTACAGAGCA AAGTGTCGTC AAAGACCCCT
TTGCAGAGTC AGCCTGTAAT CAAGTTTGCG GATCCTCTCC ACCAGCAGGT GGCACAGCAA
GTTGAACATT GCTATCAAGT CGCGGAATCT AAACTGGAAA AGCACTTTCC AAGACCTGAG
GTTGGCTTTA TGCTGCGTGG CAAGAGTGCA GGCACTGCCC ACCTGCAACT CAATAAGCTG
CGCTTCAACC CCAAGCTGCT TAATGATAAT CAGCAAGCCT TCTTAGACGA TGTGATCCCC
CATGAGATCT GCCATCTATT AGCCTTCCAG CTCTATGGCC GCGTTAAGCC CCATGGCCGA
GAATGGCAAC ACTTGATGCA GCACCTTTAT GGGCGAGTAC CGCGCACCAC CCATAGCTTC
GACACCCGCA GCGTCGAGGG CAAAACCTTT GAGTATTTCT GCCAATGTGG GCTGGTTAAC
CTCAGCATCC GCCGTCATAA CAAGGTTGTT CGCGGTGAAA CGCAATATCG CTGCCGCAAA
TGCGGCAGCA AACTAAAGCC AAACTAA
|
|---|
| Protein sequence | MFKSLNPFKS LQSKVSSKTP LQSQPVIKFA DPLHQQVAQQ VEHCYQVAES KLEKHFPRPE
VGFMLRGKSA GTAHLQLNKL RFNPKLLNDN QQAFLDDVIP HEICHLLAFQ LYGRVKPHGR
EWQHLMQHLY GRVPRTTHSF DTRSVEGKTF EYFCQCGLVN LSIRRHNKVV RGETQYRCRK
CGSKLKPN
|
|---|
| |