| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0569 |
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| Symbol | |
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| ID | 5660969 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 697337 |
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| End bp | 700180 |
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| Gene Length | 2844 bp |
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| Protein Length | 947 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641235114 |
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| Product | excinuclease ABC, A subunit |
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| Protein accession | YP_001500432 |
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| Protein GI | 157960398 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0178] Excinuclease ATPase subunit |
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| TIGRFAM ID | [TIGR00630] excinuclease ABC, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.194002 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAATA TTGAAGTACG TGGTGCTCGT ACCCACAATC TTAAAAACAT CAACCTGACT
ATTCCTCGTG ACAAACTTAT CGTGATCACC GGACTGTCGG GTTCAGGCAA ATCTTCTCTT
GCATTTGACA CCCTGTACGC TGAAGGACAA CGACGCTACG TCGAGTCATT GTCGGCCTAT
GCTCGTCAAT TCTTGAGCTT GATGGAAAAG CCTGATGTTG ACCATATTGA GGGATTAAGC
CCGGCTATTT CCATCGAGCA AAAGTCTACA TCTCATAACC CACGCTCAAC TGTGGGTACC
ATTACCGAAA TCTACGATTA TTTAAGACTG TTGTTTGCCC GTGTGGGCGA GCCTCGCTGC
CCCACTCACG GTGAGCCTTT AGCTGCACAA ACCGTAAGTC AGATGGTCGA TAAGGTGCTC
GATCTGCCAG AAGACAGTCG TCAAATGTTA CTAGCACCAG TGGTGAATAA CCGTAAGGGT
GAGCACGTTA AGCTGTTAGA AAGCTTATCC GCCCAAGGTT ATATCCGCGC CAGAATCGAT
GGAGAAGTGT GCGACTTAAC CGACCCACCT GAGCTAGACC TTCACGTAAA ACACACCATT
GAAGTGGTTG TTGACCGCTT TAAAGTACGT GGTGATATTA AACAGCGTTT AGCAGAATCA
TTTGAAACCG CGCTCGAGTT GTCTGGCGGT ATCGCTAAAA TTGCCAGCAT GGACCCAGCA
GAAGGCAAAA GCAAAGTTGA AGAACAAGTG TTTTCGGCTA ACTTTGCTTG CCCCGTATGT
GGCTACTCGA TGGCTGAGCT TGAGCCGCGT ATTTTCTCCT TTAACAATCC AGCAGGAGCC
TGCCAAACCT GTGATGGCCT TGGCGTGCAG CAATTTTTCG ATCCTGAACG CGTGATAACC
AATACTGAAC TTTCATTAGC AGGTGGCGCG ATTCGTGGCT GGGATAGACG TAACTTCTAT
TACTTCCAAA TGCTGACCTC GCTTGCCGAA CATTACAAGT TTGACATTGA GAAACCGTTT
GAGCAGCTAA GCGATGATGT ACGTAAAATC GTACTCTATG GCTCTGGCAA TCAGAGCATC
GCGTTTAAGT ATATCAACGA CCGCGGCGAT GTGGTCGTAA GAAATCATCC CTTCGAAGGG
ATCTTAAACA ACATGGACAG ACGCTACCGC GAAACCGAGT CTAATGCGGT TCGTGATGAA
CTCACGAAGT TCATTAACAC CCAGTCTTGT CAAAGCTGTG GTGGCTCTCG TCTACGTGAA
GAAGCCCGTA ACGTATTTAT TGAAGACTTA AACTTGCCAG TACTGACCCA ATGGTCAATC
GGTGAGGCTG CACAATACTT TGAGAAGCTT GAGCTAACGG GGCAACGTGC CCAGATAGCC
GATAAGATCT TAAAAGAGGT GCGCGATCGT TTAGGCTTCC TCGTTAACGT TGGCTTAAAT
TACTTAAGCC TTTCTCGCTC TGCCGACACC TTATCGGGCG GTGAAGCCCA GCGTATTCGA
CTTGCCAGCC AAATTGGCGC AGGTCTCGTG GGTGTGATGT ATGTCCTCGA TGAGCCGTCT
ATTGGTCTGC ATCAGCGAGA TAACGAGCGT TTACTGCAAA CCCTTATTCA TCTGCGCGAC
TTAGGTAACA CAGTTATCGT AGTCGAACAC GATGAAGATG CCATTCGCAT GGCGGATCAC
GTTATCGACA TCGGCCCTGG TGCAGGTGTT CACGGCGGTC AGGTCATAGG TGAAGGGACC
TTGCAAGATC TTCTCGATTG CAAGGAGTCT ATCACCGGTC AGTATCTGTC GGGCGAGAAG
ACAATTCACA TCAAAACTGA GCGCACTCAA TACGATGCAA ACAAGCTGAT TGAGCTATTT
GGTGCATCGG GCAATAACCT TAAAGATGTC GACTTGCAAA TTCCTGTAGG CTTATTCACC
TGTATTACCG GTGTGTCTGG CTCAGGTAAG TCGACACTGA TCAACGACAC CTTCTACAAG
ATTGCTCATA TACAGTTAAA TGGTGCGACG GTTGATGAGC CTTCTCCTTA CAAGAAAATT
GTCGGCATGG ATCATTGCGA CAAAGTGGTC GATATAGATC AGAGCCCCAT AGGCCGTACG
CCGCGCTCTA ACCCTGCCAC TTATACAGGT ATCTTCACTC CAATCCGTGA GCTGTTTGCT
GCCACCCAAG AATCGCGAAC TCGTGGCTAT CAGCCTGGTC GTTTCTCGTT TAACGTTAAA
GGCGGACGCT GTGAGGCTTG CCAAGGCGAT GGTTTGATCA AGGTTGAGAT GCACTTTCTA
CCCGATGTGT ATGTGCCATG TGATAACTGT AAGGGACAGC GTTATAACCG TGAAACCTTG
GATGTACGCT TTAAAGGCAA GAACATCCAC GAAGTTCTGC AGATGACTGT TGAAGAAGCG
AGACCTTTCT TCGATGCCAT CCCTGCGATA GCCCGTAAAC TTCAAACCTT GATGGATGTA
GGCTTGTCGT ATATTCGTCT AGGTCAAAGT GCGACTACCC TATCGGGTGG TGAAGCTCAG
CGCGTTAAGC TTGCTAAGGA GTTGTCTAAG CGTGACACGG GTAAGACACT ATATATTCTC
GATGAACCAA CGACGGGTCT GCACTTTGCT GATATCCAAC TATTGCTGGA CGTTTTACAT
CGGCTTAAAT CTCACGGCAA TACTATCGTG GTGATCGAGC ATAACCTAGA TGTAATAAAA
ACGGCTGATT GGATCATCGA TCTTGGCCCA GAAGGTGGTT CTGGTGGCGG TACCATTTTA
GTTGCGGGCA CACCAGAAGA GGTCGCTGAG CATACCGAGT CTCATACCGC GCGCTTCTTA
AAGCCGCTGT TAACTAAAGC ATAA
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| Protein sequence | MENIEVRGAR THNLKNINLT IPRDKLIVIT GLSGSGKSSL AFDTLYAEGQ RRYVESLSAY
ARQFLSLMEK PDVDHIEGLS PAISIEQKST SHNPRSTVGT ITEIYDYLRL LFARVGEPRC
PTHGEPLAAQ TVSQMVDKVL DLPEDSRQML LAPVVNNRKG EHVKLLESLS AQGYIRARID
GEVCDLTDPP ELDLHVKHTI EVVVDRFKVR GDIKQRLAES FETALELSGG IAKIASMDPA
EGKSKVEEQV FSANFACPVC GYSMAELEPR IFSFNNPAGA CQTCDGLGVQ QFFDPERVIT
NTELSLAGGA IRGWDRRNFY YFQMLTSLAE HYKFDIEKPF EQLSDDVRKI VLYGSGNQSI
AFKYINDRGD VVVRNHPFEG ILNNMDRRYR ETESNAVRDE LTKFINTQSC QSCGGSRLRE
EARNVFIEDL NLPVLTQWSI GEAAQYFEKL ELTGQRAQIA DKILKEVRDR LGFLVNVGLN
YLSLSRSADT LSGGEAQRIR LASQIGAGLV GVMYVLDEPS IGLHQRDNER LLQTLIHLRD
LGNTVIVVEH DEDAIRMADH VIDIGPGAGV HGGQVIGEGT LQDLLDCKES ITGQYLSGEK
TIHIKTERTQ YDANKLIELF GASGNNLKDV DLQIPVGLFT CITGVSGSGK STLINDTFYK
IAHIQLNGAT VDEPSPYKKI VGMDHCDKVV DIDQSPIGRT PRSNPATYTG IFTPIRELFA
ATQESRTRGY QPGRFSFNVK GGRCEACQGD GLIKVEMHFL PDVYVPCDNC KGQRYNRETL
DVRFKGKNIH EVLQMTVEEA RPFFDAIPAI ARKLQTLMDV GLSYIRLGQS ATTLSGGEAQ
RVKLAKELSK RDTGKTLYIL DEPTTGLHFA DIQLLLDVLH RLKSHGNTIV VIEHNLDVIK
TADWIIDLGP EGGSGGGTIL VAGTPEEVAE HTESHTARFL KPLLTKA
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