Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_0565 |
Symbol | |
ID | 5660965 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 692368 |
End bp | 693345 |
Gene Length | 978 bp |
Protein Length | 325 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 641235110 |
Product | hypothetical protein |
Protein accession | YP_001500428 |
Protein GI | 157960394 |
COG category | [R] General function prediction only |
COG ID | [COG2962] Predicted permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCATAT TCATGGACCC GCGTTCTCAA TCTTCCGAGT TTAAGCTCGG TTTTATCTTT GTTTCAGTTG CAGTTGTTTT TTGGGGGATA TTGCCGATAG CACTTAAGCT ATCTGGTCAA TTTATTGATG CTGTTACCTT AACTTGGTTT CGTTTCTTAG TCGCTTTAGT GGTTAGTTTC GCCATTCAAT ACTTAAGTGG CAGCATAAAG CAGTTCAAAG GACTGGATAA ACTCTCGTGG TTAAAAATGG CTTTAGCTGG AGTGTTGCTG ATTTTTAACT ATGTATCTTT TGTCTATTCA CTTAAGTATC TTGCGCCAGG TTCTGCTCAG CTGAACTTCC AGACTGCGCC ATTTTTTCTA GCTTTTGGTG GGGTATTGTT CTTTAAAGAG CGACTGAATG CATTCCAGCT TAGCTGTTTT GCGACTCTGG CCTTAGGTAT GTTGATGTTT TTCCATCCAT ATTTAGATTT TACGGATGGG CCGTCAGATG TATGGAAAGG GGTAATGATT GTTCAATTCT CTGTGTTGTC ATGGGCAAGT TACGCGCTTA TCCAGAAATC GATGATTAAA CGTTTATCAC CGAATAATAT TCTGCTGTTT ATCTATCTGT TTGGCATCTT CGCCATGGCA CCTTTTAGCG ACTTTAGTCA GTTTACCGTA ATGGATTCTA GTCAGTGGGC AATAGCTATC TTCTGTGCCA TTAACACTGT GATTGCTTAC GGCTGCTTTG GACAGTCGAT GAAGTACTGG CCTACAGGGC AGGTGAGCGC CATGTTGGCA TTAACACCTG TGATCAGCTT AGGCTTAACT GCAACGGTAG TGAGTTTTGG TTGGTGGAGT GAACTGATAA AAGGGGCGTA TATCGATCCG TTATCGTTTA CTGGAATAGT GTTGATTGTG GTGTCTGTGA TTCTGGTACA GCTATCGCCA ATGTGGCAAA AACGCAGAGC GTTACGAAGC CTTAAGGCTG CTGCTTAG
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Protein sequence | MAIFMDPRSQ SSEFKLGFIF VSVAVVFWGI LPIALKLSGQ FIDAVTLTWF RFLVALVVSF AIQYLSGSIK QFKGLDKLSW LKMALAGVLL IFNYVSFVYS LKYLAPGSAQ LNFQTAPFFL AFGGVLFFKE RLNAFQLSCF ATLALGMLMF FHPYLDFTDG PSDVWKGVMI VQFSVLSWAS YALIQKSMIK RLSPNNILLF IYLFGIFAMA PFSDFSQFTV MDSSQWAIAI FCAINTVIAY GCFGQSMKYW PTGQVSAMLA LTPVISLGLT ATVVSFGWWS ELIKGAYIDP LSFTGIVLIV VSVILVQLSP MWQKRRALRS LKAAA
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