Gene Spea_0565 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_0565 
Symbol 
ID5660965 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp692368 
End bp693345 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content43% 
IMG OID641235110 
Producthypothetical protein 
Protein accessionYP_001500428 
Protein GI157960394 
COG category[R] General function prediction only 
COG ID[COG2962] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCATAT TCATGGACCC GCGTTCTCAA TCTTCCGAGT TTAAGCTCGG TTTTATCTTT 
GTTTCAGTTG CAGTTGTTTT TTGGGGGATA TTGCCGATAG CACTTAAGCT ATCTGGTCAA
TTTATTGATG CTGTTACCTT AACTTGGTTT CGTTTCTTAG TCGCTTTAGT GGTTAGTTTC
GCCATTCAAT ACTTAAGTGG CAGCATAAAG CAGTTCAAAG GACTGGATAA ACTCTCGTGG
TTAAAAATGG CTTTAGCTGG AGTGTTGCTG ATTTTTAACT ATGTATCTTT TGTCTATTCA
CTTAAGTATC TTGCGCCAGG TTCTGCTCAG CTGAACTTCC AGACTGCGCC ATTTTTTCTA
GCTTTTGGTG GGGTATTGTT CTTTAAAGAG CGACTGAATG CATTCCAGCT TAGCTGTTTT
GCGACTCTGG CCTTAGGTAT GTTGATGTTT TTCCATCCAT ATTTAGATTT TACGGATGGG
CCGTCAGATG TATGGAAAGG GGTAATGATT GTTCAATTCT CTGTGTTGTC ATGGGCAAGT
TACGCGCTTA TCCAGAAATC GATGATTAAA CGTTTATCAC CGAATAATAT TCTGCTGTTT
ATCTATCTGT TTGGCATCTT CGCCATGGCA CCTTTTAGCG ACTTTAGTCA GTTTACCGTA
ATGGATTCTA GTCAGTGGGC AATAGCTATC TTCTGTGCCA TTAACACTGT GATTGCTTAC
GGCTGCTTTG GACAGTCGAT GAAGTACTGG CCTACAGGGC AGGTGAGCGC CATGTTGGCA
TTAACACCTG TGATCAGCTT AGGCTTAACT GCAACGGTAG TGAGTTTTGG TTGGTGGAGT
GAACTGATAA AAGGGGCGTA TATCGATCCG TTATCGTTTA CTGGAATAGT GTTGATTGTG
GTGTCTGTGA TTCTGGTACA GCTATCGCCA ATGTGGCAAA AACGCAGAGC GTTACGAAGC
CTTAAGGCTG CTGCTTAG
 
Protein sequence
MAIFMDPRSQ SSEFKLGFIF VSVAVVFWGI LPIALKLSGQ FIDAVTLTWF RFLVALVVSF 
AIQYLSGSIK QFKGLDKLSW LKMALAGVLL IFNYVSFVYS LKYLAPGSAQ LNFQTAPFFL
AFGGVLFFKE RLNAFQLSCF ATLALGMLMF FHPYLDFTDG PSDVWKGVMI VQFSVLSWAS
YALIQKSMIK RLSPNNILLF IYLFGIFAMA PFSDFSQFTV MDSSQWAIAI FCAINTVIAY
GCFGQSMKYW PTGQVSAMLA LTPVISLGLT ATVVSFGWWS ELIKGAYIDP LSFTGIVLIV
VSVILVQLSP MWQKRRALRS LKAAA