| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0521 |
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| Symbol | |
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| ID | 5660921 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 635435 |
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| End bp | 636916 |
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| Gene Length | 1482 bp |
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| Protein Length | 493 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641235059 |
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| Product | UbiD family decarboxylase |
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| Protein accession | YP_001500384 |
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| Protein GI | 157960350 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0043] 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases |
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| TIGRFAM ID | [TIGR00148] UbiD family decarboxylases |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTTTTA AGGATTTACG CAGCTTTATA GACCACTTAG AAACCAATGG TGAGCTTAAG
CGTATTAGTC ATCCCGTCGA TCCTCATTTG GAAATGACAG AGATTGCCGA TCGTGTACTA
CGCGCCAAAG GTCCAGCTCT GTTATTCGAA AATCCTGTCG GCAACGACAT GCCTGTGCTT
GCTAACCTTT TTGGTACCCC AAAACGGGTG GCGATGGCAT TAGGTAAAGA AGATCCCCTC
GCGCTACGCG ATGTGGGTGA GCTGCTGGCT TTTTTAAAAG AGCCTGAGCC TCCTCGCGGT
TTTAAAGACG CTATCTCAAA AATCCCTATG TTTAAGCAAG CCTTAAACAT GCCGCCAAAG
ACAGTGCGTA ACCCACCTTG CCAACAAGTG GTTAAAACCG GTGACGAGGT CGACTTAACT
AAATTGCCTA TTCAGCACTG CTGGCCAGGC GATGTGGCGC CGCTTGTCAC TTGGGGATTA
ACCATCACCA AGGGCCCACG CCAAAAACGC CAAAACTTGG GTATTTACCG CCAGCAATTA
CTCGGTAGAG ACAAGTTAAT TATGCGCTGG CTTGACCATC GCGGCGGCGC ACTAGATTTT
AAAGATTTCA AAGAGAAGCA CCCAGGTGAA CGTTATCCAG TAGTCGTGGC ATTAGGCGCC
GATCCGGTGA CCATTTTAGG CGCGGTAACG CCAGTGCCGG ATGCCATGAG CGAGTATGCC
TTTGCTGGCC TGCTGCGCGG TGAACGCACC GAAGTCTGTA AAGCGTTAAG CTGTGACTTA
GAAGTACCCG CCACCAGCGA AATCATCTTA GAAGGTTATA TCGATCCTGA CGAGATGGCT
GAAGAAGGCC CGTACGGCGA TCACACAGGT TACTACAACG AAACAGACTC TTTCCCTGTG
TTTACGGTGA CGCACATCAC CCACAGAAAA GATGCCATCT ACCACAGCAC CTACACCGGC
CGTCCACCAG ATGAGCCAGC CATGCTAGGT GTGGCACTGA ATGAAGTTTT TGTACCAATT
CTGCGTAAGC AATACCCTGA GATTATTGAC TTTTACCTGC CGCCTGAAGG CTGCTCGTAC
CGTATGGCGG TGATCTCTAT CCGTAAGCAA TATCCAGGAC ATGCCAAGCG GGTGATGATG
GGCGCATGGT CTTTCCTACG TCAGTTTATG TACACCAAGT TTATTGTGGT GGTCGACGAG
GATGTAAATT GTCGCGACTG GAACGATGTG ATTTGGGCTA TTACCACCCG TATGGATCCT
AAGCGTGACA CTGTCATGAT CGAAAACACC CCAATCGATT ATCTCGACTT TGCCTCACCG
GTTGCAGGTC TTGGCTCTAA AATGGGTATG GATGCCACTA ACAAATGGGA AGGCGAAACC
GATCGTGAAT GGGGTACCCC TATCGTGATG GATGAAGCTG TGAAGCAAAA AGTCGATGCT
ATTTGGGATG ACCTAGGCAT TGATGACGCA CCGACCCTAT AA
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| Protein sequence | MSFKDLRSFI DHLETNGELK RISHPVDPHL EMTEIADRVL RAKGPALLFE NPVGNDMPVL
ANLFGTPKRV AMALGKEDPL ALRDVGELLA FLKEPEPPRG FKDAISKIPM FKQALNMPPK
TVRNPPCQQV VKTGDEVDLT KLPIQHCWPG DVAPLVTWGL TITKGPRQKR QNLGIYRQQL
LGRDKLIMRW LDHRGGALDF KDFKEKHPGE RYPVVVALGA DPVTILGAVT PVPDAMSEYA
FAGLLRGERT EVCKALSCDL EVPATSEIIL EGYIDPDEMA EEGPYGDHTG YYNETDSFPV
FTVTHITHRK DAIYHSTYTG RPPDEPAMLG VALNEVFVPI LRKQYPEIID FYLPPEGCSY
RMAVISIRKQ YPGHAKRVMM GAWSFLRQFM YTKFIVVVDE DVNCRDWNDV IWAITTRMDP
KRDTVMIENT PIDYLDFASP VAGLGSKMGM DATNKWEGET DREWGTPIVM DEAVKQKVDA
IWDDLGIDDA PTL
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