| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0509 |
|---|
| Symbol | |
|---|
| ID | 5660909 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella pealeana ATCC 700345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009901 |
|---|
| Strand | + |
|---|
| Start bp | 622713 |
|---|
| End bp | 623201 |
|---|
| Gene Length | 489 bp |
|---|
| Protein Length | 162 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 641235047 |
|---|
| Product | NosL family protein |
|---|
| Protein accession | YP_001500372 |
|---|
| Protein GI | 157960338 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG4314] Predicted lipoprotein involved in nitrous oxide reduction |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAC TGCTGCTCAT TCTGTTATTG GTCCCCTTTA TGTTTGCCTG TAGCCAAGGA
GACACTGCTT CGCAGCCGAC ACAAGCCGAG GCGATTCATG AGCATGATCG TTGCCACCTG
TGTGGCATGA TGATTACTAA GTACCCAGGT CCTAAAGCGC AGTTGAGGCT GAAAGGTGAA
ACCATAGTGC CCAAGTTCTG CTCGACAAGA GATATGTTTA ATTTTGCGCT ACAGCCAGAG
AATAAGCGTC AGATCACCCA CTTAAAAGTA CATGATATGT CGGTGACTGA TTGGGAAAGC
CCTGACGATA GTGCCTTTGT CGATGCCGAG TCTGCCTGGT ATGTCTATGG CACCAGTAGA
AAGGCGGTGA TGGGGCCAGC TGTCGCTTCA TTTGCGTCCA AAGAAGGGGC TACACAGTTT
GCCACTGAAT TTGGCGGTGC GGTGCTTACC TATGAGCAGA TCACCATTGG ACTGTTAGCG
GGTGAGTAA
|
|---|
| Protein sequence | MKKLLLILLL VPFMFACSQG DTASQPTQAE AIHEHDRCHL CGMMITKYPG PKAQLRLKGE
TIVPKFCSTR DMFNFALQPE NKRQITHLKV HDMSVTDWES PDDSAFVDAE SAWYVYGTSR
KAVMGPAVAS FASKEGATQF ATEFGGAVLT YEQITIGLLA GE
|
|---|
| |