Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_0475 |
Symbol | |
ID | 5660875 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 584666 |
End bp | 586195 |
Gene Length | 1530 bp |
Protein Length | 509 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641235013 |
Product | Na+/H+ antiporter NhaC |
Protein accession | YP_001500338 |
Protein GI | 157960304 |
COG category | [C] Energy production and conversion |
COG ID | [COG1757] Na+/H+ antiporter |
TIGRFAM ID | [TIGR00931] Na+/H+ antiporter NhaC |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCTCAA ACAATGATCT TCAACAGTCT GAACCAGTGA CTATGGAGCC TCTGCAAGAT AGCAAACATA CCACCCCAAC ATTACTTGAT GCACTTCTAC CTATTATCGC TTTAGTGATA ATGCTCACAG CTGCCGTCTA CCTATTCTCA TCCGACAGCT CTTATGGGGC AAACCAGATA GCCTTGATTA TGGCTGGCTG TATCGGGTTA TTGATAGGTT GGAAGAATGG TTATAGCTGG GCGGAAATGG AGCAAGGCAT CGTCCGCAGT ATCGGTGTCG CCACCGGGGC AATACTCATT CTATTTACCG TTGGTTCCCT CATTGGCAGC TGGATCCTTG CTGGCACGGT CCCGACCATG ATCTATTACG GCATGTTGGT GCTAAATCCT GAATATTTTT ATGCGGCTTG TTGTTTGTTA TGTGCGGTTG TCGCCATCAG TATCGGTAGC TCATGGACGG TCGCAGGTAC GTTAGGTATC GCCTTGGTCG GCGTGGCGTC AGCCATGGGA CTCAGTGTCG AAATCACCGC TGGTGCCATC ATTAGTGGTG CGTACTTTGG CGATAAGATG TCTCCTATGT CAGACACCAC AAATTTAGCG CCAGCCGTTG CAGGAACCGA TATTTTTAGC CATATCCGAC ATATGGTTTG GACCACAGTG CCAAGTATCA TCATTGCCAT GATCTGTTTT CTATTGTTAG GTTTTAATAA TCAGGCAGTT ATAGACAACA ATAACTTTGA GCAGACCTTA TCCCTAATTC AGACGCAGTT TAATCCTGGA GTTCACCTGC TGTTACCACT GTTAGTCGTG TTTATCTTAG CCTGGAAAAA AATCCCCGCC TTTCCAACAG TCATCATAGG CACTATAGCT GGAGCTATCT GCGCGGTGCT GTTTCAGTTT GATAACGTCG TGAATTTTGC AGGTGATGAC AGCCTAAGCC CAGTGGTTGC TTTGGTAAAA GGGGTCTGGG TGGCAATGTT TAATGGCTAT ACGGCGAGCA CGGGTGACGA GGTGCTGGAT AACCTACTGA GCCGCGGCGG CATGAGTAGC ATGATCAATA CCGTGTGGTT GATCCTATGC GCGATGACCT TCGGTGGCAT CATGGAAGTG ACAGGCCTGC TTAAGCGCAT TTTGCAAAGT GTTTTAGGCT TAGTGAAATC TAGCGGCAGC TTGATTATAA CCACGCTAGC AAGTTGTATT GGCGCCAACC TTATCACCGC CGATCAGTTT ATCGCTATCG TGCTTCCGGG GAGAATGCTT AAGGTGGAGT ACACCAAACG CGGCTTAGCA CCGGTTAATT TGAGTCGTGC TCTTGAGGAT TCAGCCACCA TTACCAGTCC GCTTATTCCG TGGAATACCT GTGGCGCCTA CATGGCGAGT ACTCTAGGCG TTGCGACGGT GGCATATCTT CCATACGCAT TTTTCAATTT AGTTTGTCCG CTGATCAGCG CCGCCTATGC TAAATATGAC TTTAAAGTTG AGCGTTTACC TCAAGCAGAA GTACCACAAA CCGAGCAGGC GGTAGCTTAA
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Protein sequence | MSSNNDLQQS EPVTMEPLQD SKHTTPTLLD ALLPIIALVI MLTAAVYLFS SDSSYGANQI ALIMAGCIGL LIGWKNGYSW AEMEQGIVRS IGVATGAILI LFTVGSLIGS WILAGTVPTM IYYGMLVLNP EYFYAACCLL CAVVAISIGS SWTVAGTLGI ALVGVASAMG LSVEITAGAI ISGAYFGDKM SPMSDTTNLA PAVAGTDIFS HIRHMVWTTV PSIIIAMICF LLLGFNNQAV IDNNNFEQTL SLIQTQFNPG VHLLLPLLVV FILAWKKIPA FPTVIIGTIA GAICAVLFQF DNVVNFAGDD SLSPVVALVK GVWVAMFNGY TASTGDEVLD NLLSRGGMSS MINTVWLILC AMTFGGIMEV TGLLKRILQS VLGLVKSSGS LIITTLASCI GANLITADQF IAIVLPGRML KVEYTKRGLA PVNLSRALED SATITSPLIP WNTCGAYMAS TLGVATVAYL PYAFFNLVCP LISAAYAKYD FKVERLPQAE VPQTEQAVA
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