Gene Spea_0475 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_0475 
Symbol 
ID5660875 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp584666 
End bp586195 
Gene Length1530 bp 
Protein Length509 aa 
Translation table11 
GC content48% 
IMG OID641235013 
ProductNa+/H+ antiporter NhaC 
Protein accessionYP_001500338 
Protein GI157960304 
COG category[C] Energy production and conversion 
COG ID[COG1757] Na+/H+ antiporter 
TIGRFAM ID[TIGR00931] Na+/H+ antiporter NhaC 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCTCAA ACAATGATCT TCAACAGTCT GAACCAGTGA CTATGGAGCC TCTGCAAGAT 
AGCAAACATA CCACCCCAAC ATTACTTGAT GCACTTCTAC CTATTATCGC TTTAGTGATA
ATGCTCACAG CTGCCGTCTA CCTATTCTCA TCCGACAGCT CTTATGGGGC AAACCAGATA
GCCTTGATTA TGGCTGGCTG TATCGGGTTA TTGATAGGTT GGAAGAATGG TTATAGCTGG
GCGGAAATGG AGCAAGGCAT CGTCCGCAGT ATCGGTGTCG CCACCGGGGC AATACTCATT
CTATTTACCG TTGGTTCCCT CATTGGCAGC TGGATCCTTG CTGGCACGGT CCCGACCATG
ATCTATTACG GCATGTTGGT GCTAAATCCT GAATATTTTT ATGCGGCTTG TTGTTTGTTA
TGTGCGGTTG TCGCCATCAG TATCGGTAGC TCATGGACGG TCGCAGGTAC GTTAGGTATC
GCCTTGGTCG GCGTGGCGTC AGCCATGGGA CTCAGTGTCG AAATCACCGC TGGTGCCATC
ATTAGTGGTG CGTACTTTGG CGATAAGATG TCTCCTATGT CAGACACCAC AAATTTAGCG
CCAGCCGTTG CAGGAACCGA TATTTTTAGC CATATCCGAC ATATGGTTTG GACCACAGTG
CCAAGTATCA TCATTGCCAT GATCTGTTTT CTATTGTTAG GTTTTAATAA TCAGGCAGTT
ATAGACAACA ATAACTTTGA GCAGACCTTA TCCCTAATTC AGACGCAGTT TAATCCTGGA
GTTCACCTGC TGTTACCACT GTTAGTCGTG TTTATCTTAG CCTGGAAAAA AATCCCCGCC
TTTCCAACAG TCATCATAGG CACTATAGCT GGAGCTATCT GCGCGGTGCT GTTTCAGTTT
GATAACGTCG TGAATTTTGC AGGTGATGAC AGCCTAAGCC CAGTGGTTGC TTTGGTAAAA
GGGGTCTGGG TGGCAATGTT TAATGGCTAT ACGGCGAGCA CGGGTGACGA GGTGCTGGAT
AACCTACTGA GCCGCGGCGG CATGAGTAGC ATGATCAATA CCGTGTGGTT GATCCTATGC
GCGATGACCT TCGGTGGCAT CATGGAAGTG ACAGGCCTGC TTAAGCGCAT TTTGCAAAGT
GTTTTAGGCT TAGTGAAATC TAGCGGCAGC TTGATTATAA CCACGCTAGC AAGTTGTATT
GGCGCCAACC TTATCACCGC CGATCAGTTT ATCGCTATCG TGCTTCCGGG GAGAATGCTT
AAGGTGGAGT ACACCAAACG CGGCTTAGCA CCGGTTAATT TGAGTCGTGC TCTTGAGGAT
TCAGCCACCA TTACCAGTCC GCTTATTCCG TGGAATACCT GTGGCGCCTA CATGGCGAGT
ACTCTAGGCG TTGCGACGGT GGCATATCTT CCATACGCAT TTTTCAATTT AGTTTGTCCG
CTGATCAGCG CCGCCTATGC TAAATATGAC TTTAAAGTTG AGCGTTTACC TCAAGCAGAA
GTACCACAAA CCGAGCAGGC GGTAGCTTAA
 
Protein sequence
MSSNNDLQQS EPVTMEPLQD SKHTTPTLLD ALLPIIALVI MLTAAVYLFS SDSSYGANQI 
ALIMAGCIGL LIGWKNGYSW AEMEQGIVRS IGVATGAILI LFTVGSLIGS WILAGTVPTM
IYYGMLVLNP EYFYAACCLL CAVVAISIGS SWTVAGTLGI ALVGVASAMG LSVEITAGAI
ISGAYFGDKM SPMSDTTNLA PAVAGTDIFS HIRHMVWTTV PSIIIAMICF LLLGFNNQAV
IDNNNFEQTL SLIQTQFNPG VHLLLPLLVV FILAWKKIPA FPTVIIGTIA GAICAVLFQF
DNVVNFAGDD SLSPVVALVK GVWVAMFNGY TASTGDEVLD NLLSRGGMSS MINTVWLILC
AMTFGGIMEV TGLLKRILQS VLGLVKSSGS LIITTLASCI GANLITADQF IAIVLPGRML
KVEYTKRGLA PVNLSRALED SATITSPLIP WNTCGAYMAS TLGVATVAYL PYAFFNLVCP
LISAAYAKYD FKVERLPQAE VPQTEQAVA