| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0471 |
|---|
| Symbol | |
|---|
| ID | 5660871 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella pealeana ATCC 700345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009901 |
|---|
| Strand | - |
|---|
| Start bp | 580895 |
|---|
| End bp | 581914 |
|---|
| Gene Length | 1020 bp |
|---|
| Protein Length | 339 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 641235009 |
|---|
| Product | putative esterase |
|---|
| Protein accession | YP_001500334 |
|---|
| Protein GI | 157960300 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2819] Predicted hydrolase of the alpha/beta superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCATCCC TAAACTGCAA TGCCCCATTA CTTAGACTCA TGCTTTGCAC CATACTGTTA
GCAAGCTTTT TTCCTACTAG GTGTATGGCA AATAAACCCG TTATCGAAGC AACTGCACAC
TTAACCACAC CTTTTAGCAT TCCCCGTAGT CATACAGTGC AAATTAACGA TGAAGCACGC
ACCTATCGGC TCTATGTCAA GCTGCCAAAA GGTTACAAAT CTTCTGCAAA CAAAGACATT
AATTATCCGG TGATTTATCT TACCGATGCC ATGTATACCT TTCAGATCAT GTCTGGCGTA
ACCCGCTTTC CTATGAATTC AAAGCAAATG ACGCCTGCGA TTATCGTCGG GATCTCATGG
GAGCTTGGCC TGAGAAGCGA TCATAGCCGA GTCAGGGACT ACACCCCTAC GGTAGACGCG
AGTTGGGAAA AAGTCACTGG CGGGGCAGAT AGACATTTAC ACTTTTTTAA GAGCAAAATC
ATCCCCTATA TAGAGCAGAA TTACCGCACG GATCCCGCTC AACGAACCTA TGTTGGTAAC
TCTTTAGGTG GCCTATTTGG CGCTTATATT CTATTAAAAC AGCCAGATCT GTTTACTAAT
TACCTGATAG GCAGCCCATC TTTTTGGTGG CATGAACGCT GGTTTCTGAC TCAATTTGCA
AAGAATATCG CCTCACTTAA CAAGATAGAT GCCAATGTCT TTATTGGTAT TGGCGCCCTT
GAGCATAATG GTGAAGACGG AGATTCTCAG TACAATATGG TGGCCGATGC ACAGCACTTT
AAGGCATTAC TAAACAACCT TGAGATCAGC AGCCCAGCAT TTAGCAGCAA GCTATTGATT
ATCGATGAGG CTCACCACGC CACAGCTTTT GCGACCACGG CGATTCATGG CATGGATTGG
CTGTTTAACA CTAAGCAAGG GAGGATGCTT CAGAGTTCGA TAGATACTGC CGACAGCAAG
AAGTTAAAGA GTTCACAGCA GTTAACACCT AAATCACCAA TCACTACAGA GAAGTTCTAA
|
|---|
| Protein sequence | MSSLNCNAPL LRLMLCTILL ASFFPTRCMA NKPVIEATAH LTTPFSIPRS HTVQINDEAR
TYRLYVKLPK GYKSSANKDI NYPVIYLTDA MYTFQIMSGV TRFPMNSKQM TPAIIVGISW
ELGLRSDHSR VRDYTPTVDA SWEKVTGGAD RHLHFFKSKI IPYIEQNYRT DPAQRTYVGN
SLGGLFGAYI LLKQPDLFTN YLIGSPSFWW HERWFLTQFA KNIASLNKID ANVFIGIGAL
EHNGEDGDSQ YNMVADAQHF KALLNNLEIS SPAFSSKLLI IDEAHHATAF ATTAIHGMDW
LFNTKQGRML QSSIDTADSK KLKSSQQLTP KSPITTEKF
|
|---|
| |