| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0423 |
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| Symbol | |
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| ID | 5660823 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 522943 |
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| End bp | 525159 |
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| Gene Length | 2217 bp |
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| Protein Length | 738 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641234960 |
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| Product | patatin |
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| Protein accession | YP_001500286 |
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| Protein GI | 157960252 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.25247 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTAATA GAATTATTAT TCTTTGTCTA GCACTGGCTA GTTCGCAAGT TTCGTTCGCA
GAAGAGCGGC CTAAAATCGG CTTAGTCTTG AGTGGTGGCG GTGCCAAAGG TGCGGCCCAT
ATCGGCGTGC TTAAGGTGCT GGAAGAGAAA AACATCCCCA TCGACTATAT TGCTGGAACC
AGTATCGGTG CCTATGTGGG CGGCATGTAC GCATTAGGCT ATAGTGCGGC AGAGATTGAA
GCCATCATGA TGAAGACCGA TTGGAGTAAA GGTTATTCAG ACACCATCCC TAGGGAGTCA
TTAAGCTACC GAGACAAAGA GACCCGCGAT CAGTTTAATA TTCCGATAAA TATTGGCTAT
AGCGACGAGC AAGTTAAAAC GCCAGCTGGC TTGTTACGCG GGCAAACTAT GTCGCAGCTG
CTACGTAGTT CAACGGATTT GGTGCATCAG TTCGGTGATT TTGATGATCT TTCTATTCCA
TATCGAGCTG TAGCAACAGA CTTAGTGACC AGTGAACCTG TGGTGCTGAG TTCAGGTAGT
GTGGTTGCTG CAATGCAGGC CTCAGCGTCA GTGCCTGGCG CCCTGCAACC GGCAGTTATC
GATGGCAAGT TGCTGGTGGA CGGCGGGATT GCCAACAATA TGCCTGTCGA TGTAGTTAAG
GCGATGGGGG CCGACATTGT TATCGCGGTC GATATCGGTT CCCCCTTGGT GAGTAAAGAT
GAGCTTAATA GCACTATAGC GGTGTTGAAT CAATTATCTA CAATTCTTAC CAATGCTAGC
TCCGAGAGGC AGAAAGCCCT ACTCAGTGAT CATGATATCT TGATCCGTCC TAACATTGGC
GAGTTAAGCA CCACAGATTT TAGCATTATG CCTATCGCGT TGCCGCTAGG AGAAATTGCG
GCACGAGAGC AGAGCGATAA ACTTGAGCAA TACAGTGATG GTAGCGAAGA TTACAAACAG
TATTTGGCTC ACAAAAGAAA TAAGAGTAAG CAATGGCTAG CAGAGATAGA TAGGCCGTTG
ATCAAAGTGA TTTACAACAA TGACTCAAAG GTTAGTGAGA AATTATTAGC GGACAATCTT
GATCTGGATG TTGGTGACCA TGTCACAGTC GAAGACTTAG AGGCTGGCCT AGATAGAATT
TATGCATTGG ATAAGTTTGA ACGTGTCGAT GCAGAGTTTA CCGATACCGA TGAGGGACGA
GTATTAACCG TTACTACCAA GGCTAAGTCC TGGGGGCCGA ATTACTTTCA GCTGGGCTTT
AGTTGGGAAG ATGATTTTAG CCTAGACTCT GTCATCTCTC TCGATATGGC TTATACCATG
ACTGAGCTTA CCGAGAATGG GGGAGAGTGG CGTAATGAGT TGTCACTCGG TTTTGATAAA
CTATTAGCAT CTGAGTTTTA TCAGCCGTTA GCAAAAGATC AGTCCTATTT CAGCCGTGCT
AGGGTCGAGT ATGAACTTAA AGATTGGAGC TTCTTTGAAA ATAATAACCG GGTGTTAGAG
CTGAAACAAA CGGCATACCG TACCGAAGTC GGTATCGGTG CTAACTACAC CCAAAACGGC
ATGGTCGAAA TCGGTATGCT GGGGGAAAGA GGCGATCTTG AGAACGATGT TTGGGGATTG
GGCAAGGTGG ATTACACCGG TTATGGAGGC TACTTCAAGT TTGCCTATGA TGACCTAAAT
AGCATCAACT TCCCGACTTC GGGTAATCGA TTTACCTTTA ATGTGTATAT GAGAAAAGAG
AGTTATGATT TAGATGGTGT CGGAGATACT TCTGATTTCT CAATGCAGTA TGAAGCCGAT
TGGCGCGGAG CCGTTGGTGT GGGTAATCAT GCCTTTGTGG GTATAGCCTC GCTGGCAACC
GTTGATAAAG ACGGCGCGTT TACCGTTAAC GTCTCTGAGC TTGGTGGATT CTTAAATCTT
TCTGGTTATC ATAAAAATGC GCTTTATGGT TCCCATAAAA TATTTGGTGC CTTTGTCTAT
CAGTATGACT TAGGTCGTGA TGTACTGGGA ATGACCGAAT ATCCGCTCTA TTTAGGCACC
AGTATTGAGG CGGGTAATGT GTGGAATCAA AAAGACAATG TGTCACTCGA TGACTTAATC
TATGCGGGAA GCTTGTACTT AGGTATTGAT ACCAGCGTTG GCCCCGCAGC GTTTGGTTTT
GGTGCATCCG ACGATGGTGA GAAAACCGTA TTCCTGTTTA TTGGTAAGAA CTGGTAG
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| Protein sequence | MINRIIILCL ALASSQVSFA EERPKIGLVL SGGGAKGAAH IGVLKVLEEK NIPIDYIAGT
SIGAYVGGMY ALGYSAAEIE AIMMKTDWSK GYSDTIPRES LSYRDKETRD QFNIPINIGY
SDEQVKTPAG LLRGQTMSQL LRSSTDLVHQ FGDFDDLSIP YRAVATDLVT SEPVVLSSGS
VVAAMQASAS VPGALQPAVI DGKLLVDGGI ANNMPVDVVK AMGADIVIAV DIGSPLVSKD
ELNSTIAVLN QLSTILTNAS SERQKALLSD HDILIRPNIG ELSTTDFSIM PIALPLGEIA
AREQSDKLEQ YSDGSEDYKQ YLAHKRNKSK QWLAEIDRPL IKVIYNNDSK VSEKLLADNL
DLDVGDHVTV EDLEAGLDRI YALDKFERVD AEFTDTDEGR VLTVTTKAKS WGPNYFQLGF
SWEDDFSLDS VISLDMAYTM TELTENGGEW RNELSLGFDK LLASEFYQPL AKDQSYFSRA
RVEYELKDWS FFENNNRVLE LKQTAYRTEV GIGANYTQNG MVEIGMLGER GDLENDVWGL
GKVDYTGYGG YFKFAYDDLN SINFPTSGNR FTFNVYMRKE SYDLDGVGDT SDFSMQYEAD
WRGAVGVGNH AFVGIASLAT VDKDGAFTVN VSELGGFLNL SGYHKNALYG SHKIFGAFVY
QYDLGRDVLG MTEYPLYLGT SIEAGNVWNQ KDNVSLDDLI YAGSLYLGID TSVGPAAFGF
GASDDGEKTV FLFIGKNW
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